Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_P07
         (548 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1157 - 24419157-24419948                                         27   7.5  
12_02_0895 + 24094809-24094886,24097197-24097402,24097493-24097919     27   9.9  
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773...    27   9.9  
03_01_0272 + 2105579-2105671,2105779-2105882,2106006-2107014,210...    27   9.9  

>07_03_1157 - 24419157-24419948
          Length = 263

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 503 PNVESDAAAVPEIKTPEAADAPKLADNPVDEDKP 402
           P  E   AAVPE+  PE    P + + P  E+ P
Sbjct: 177 PKPEVPHAAVPELPKPELPPHPAVPELPKHEEPP 210


>12_02_0895 + 24094809-24094886,24097197-24097402,24097493-24097919
          Length = 236

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 32  CRERHSHSHGVVS----HIYATVNLSRWQRSTS*CVRCK 136
           C ER   + G++     HI+ +  L RW RS S C  C+
Sbjct: 189 CLERCGDADGLLELRCKHIFHSACLERWLRSRSDCPYCR 227


>08_02_1237 +
           25475219-25475916,25476127-25476320,25476407-25477302,
           25477416-25477490,25477582-25477689,25477780-25477897,
           25478007-25478142,25478228-25478372,25478460-25479080,
           25479166-25479597
          Length = 1140

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -1

Query: 149 HASTACSEHINSCSAANARD*L*RICVKLPHVSES---GVLYTEVDNW 15
           + ST+CS+H  S S ++ +D   RI  KL     S   G L  E+ NW
Sbjct: 578 YTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNW 625


>03_01_0272 +
           2105579-2105671,2105779-2105882,2106006-2107014,
           2107130-2107153
          Length = 409

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 521 KKIDLAPNVES-DAAAVPEIKTPEAADAPKLADNPVDE 411
           KK+   PNV + +AAA+PE +  +  +A   A +  DE
Sbjct: 79  KKVTFDPNVTTYEAAAIPEAEEEDDEEAEPAAGDDKDE 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,509,103
Number of Sequences: 37544
Number of extensions: 155501
Number of successful extensions: 515
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)