Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_O14
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 71 1e-12
Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 30 1.6
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 30 1.6
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 29 3.6
Z34799-1|CAA84315.1| 147|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 29 4.8
Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical p... 28 6.4
Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.4
U80023-3|AAG24039.1| 324|Caenorhabditis elegans Serpentine rece... 28 8.4
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 28 8.4
AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical ... 28 8.4
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 28 8.4
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = -3
Query: 766 KEKEGKDXILLNIIFKETXXXXXXXXXXXXPIISGGYVLVGGAICMELLTKQGWSSAYTV 587
K+ +D +L + F E P I+ G+VL GGAICMELLTKQGWSSAY++
Sbjct: 271 KKDHNQDHLLFSFTFNEKFPCDPPFVRVVAPHINQGFVLGGGAICMELLTKQGWSSAYSI 330
Query: 586 EAVIMQIAATPGEGQ 542
E+ I+QIAAT +G+
Sbjct: 331 ESCILQIAATLVKGR 345
Score = 65.3 bits (152), Expect = 5e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -1
Query: 555 LVKGKARIQFSATKVVSQTQYSLARAQQSFKCLVQIHEKNGWFTPPKEDG 406
LVKG+ARI F A + YS+ARAQQSFK L QIH K+GW+TPPK +G
Sbjct: 341 LVKGRARISFDAKHT---STYSMARAQQSFKSLQQIHAKSGWYTPPKTEG 387
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = -3
Query: 766 KEKEGKDXILLNIIFKETXXXXXXXXXXXXPIISGGYVLVGGAICMELLTKQGWSSAYTV 587
K+ +D +L + F E P I+ G+VL GGAICMELLTKQGWSSAY++
Sbjct: 271 KKDHNQDHLLFSFTFNEKFPCDPPFVRVVAPHINQGFVLGGGAICMELLTKQGWSSAYSI 330
Query: 586 EAVIMQIAATPGEGQ 542
E+ I+QIAAT +G+
Sbjct: 331 ESCILQIAATLVKGR 345
Score = 65.3 bits (152), Expect = 5e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -1
Query: 555 LVKGKARIQFSATKVVSQTQYSLARAQQSFKCLVQIHEKNGWFTPPKEDG 406
LVKG+ARI F A + YS+ARAQQSFK L QIH K+GW+TPPK +G
Sbjct: 341 LVKGRARISFDAKHT---STYSMARAQQSFKSLQQIHAKSGWYTPPKTEG 387
>Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical
protein K02C4.5 protein.
Length = 422
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 503 RLSTVWPVHSRASNVLFRYMRKMAGSHLR--KRMGNWNCGAL 384
RLS + VHSR +N L +YM HL K ++CGA+
Sbjct: 45 RLSEIAKVHSRTANNLKKYMDPKKNEHLNLWKMCNVYSCGAV 86
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 643 GAICMELLTKQGWSSAYTVEAVIMQIAATPGEGQGSDPV 527
G+IC+++L Q WS A T+ V++ I + + DP+
Sbjct: 82 GSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 643 GAICMELLTKQGWSSAYTVEAVIMQIAATPGEGQGSDPV 527
G+IC+++L Q WS A T+ V++ I + + DP+
Sbjct: 82 GSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 526 QCHQSCFTDSVQSGPCTAELQMSCS 452
QC+Q C + ++ SGP + Q +CS
Sbjct: 76 QCNQQCTSITISSGPSCSSCQSACS 100
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -3
Query: 604 SSAYTVEAVIMQIAATPGEGQGSDPV-QCHQSCFTDSVQSGPCTAELQMSCSDT 446
+SA ++QI Q S QC QSC VQ A+ Q +C D+
Sbjct: 291 TSAPASSQAVIQIVLQSSVAQSSQCTPQCEQSCQQQCVQQQQPAAQCQSACQDS 344
>Z34799-1|CAA84315.1| 147|Caenorhabditis elegans Hypothetical
protein F34D10.3 protein.
Length = 147
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 304 FVCLYARLVFMYVLNMNGRFASIVRVLL*VVMF*IKCGALTKDYTR 167
FVC+ ++VF ++ + FA + ++ + F I CG + D TR
Sbjct: 90 FVCITCKVVFEVLIAIRLTFALSIPYIVYFIPFWIFCGIIFVDLTR 135
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 643 GAICMELLTKQGWSSAYTVEAVIMQIAATPGEGQGSDP 530
G IC+++L K W+++ T+ V++ + A + SDP
Sbjct: 118 GTICLDIL-KDKWTASLTLRTVLLSLQAMLCSPEPSDP 154
>Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical
protein C47B2.6b protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/59 (23%), Positives = 22/59 (37%)
Frame = -2
Query: 755 GKRLYSSQHYIQGNLSIRXAFCACCLSYNLRRLCISRRCDMYGAINEARLVIRVHCGSG 579
G+ + Y NL CL YN++ S +YG +E + + G G
Sbjct: 95 GESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSELPITEKSQTGQG 153
>Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical
protein C47B2.6a protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/59 (23%), Positives = 22/59 (37%)
Frame = -2
Query: 755 GKRLYSSQHYIQGNLSIRXAFCACCLSYNLRRLCISRRCDMYGAINEARLVIRVHCGSG 579
G+ + Y NL CL YN++ S +YG +E + + G G
Sbjct: 93 GESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSELPITEKSQTGQG 151
>U80023-3|AAG24039.1| 324|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 30 protein.
Length = 324
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 284 TRFYVCAEYEWTFCEYCTCIIVSGNVLNQVRGVNERLYK 168
T F V Y W C+ + G+V V+ +N+RL K
Sbjct: 185 TAFLVVVAYIWIRETLCSFAVKMGSVKKDVKNLNKRLVK 223
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 643 GAICMELLTKQGWSSAYTVEAVIMQIAATPGEGQGSDP 530
G IC+++L Q W+++ T+ V++ I A + DP
Sbjct: 89 GVICLDILKDQ-WAASLTLRTVLLSIQALMCTPEPKDP 125
>AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical
protein C18G1.6 protein.
Length = 464
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 353 VVTLGVTNRYTALRSSNYPSSFGGVNQPFF 442
V L N Y A+ S Y + F GV++P F
Sbjct: 299 VGALSFGNNYVAMEPSIYDNGFSGVSEPVF 328
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 643 GAICMELLTKQGWSSAYTVEAVIMQIAATPGEGQGSDPV 527
G IC+++L K WS A + V++ I A DP+
Sbjct: 85 GRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPEDPL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,780
Number of Sequences: 27780
Number of extensions: 385256
Number of successful extensions: 942
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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