Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_O14
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    27   0.19 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.1  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 626 AINEARLVIRVHCGSGDHADSRH 558
           A  E  L +R+H G G + D+RH
Sbjct: 250 ASGELELTLRIHRGGGTNTDARH 272


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 201 IQNITTYNNTRTILAKRPFIFSTYIKTSRAYRQTNVMEML 320
           +  IT +   R I    PFI  T  K SRA +   V+ +L
Sbjct: 142 VLTITAFTVERYIAICHPFISHTMSKLSRAVKFIIVIWLL 181



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 361 VGRNKSLHSAPQFQL 405
           + RNKS+H+A  + L
Sbjct: 78  IARNKSMHTATNYYL 92


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 511 NFGGTELDPSLALHQGWR 564
           N GGT L   +A H+G R
Sbjct: 149 NLGGTTLHHGMAYHRGHR 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,520
Number of Sequences: 438
Number of extensions: 5012
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)