Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_O12
         (477 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99288-9|CAB16551.2|  335|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U80842-11|AAB37941.2|  231|Caenorhabditis elegans Hypothetical p...    28   3.0  
Z54281-4|CAA91049.1|  199|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AF025468-7|AAB71044.1|  248|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z81497-6|CAB04082.2|  604|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z75953-5|CAB00102.2|  604|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF024503-5|AAG24096.1|  330|Caenorhabditis elegans Serpentine re...    27   9.2  
AF016664-10|AAB66064.3|  330|Caenorhabditis elegans Serpentine r...    27   9.2  
AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z99288-9|CAB16551.2|  335|Caenorhabditis elegans Hypothetical
           protein ZK262.10 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +1

Query: 64  FDKLVPYSNLLIIFTNILISGMFTILNFKYVHRYSI-YNCSLL 189
           F+K  PY+  ++   + +IS  + +L+  +V+RY + +N  LL
Sbjct: 81  FEKTSPYAPFVLCLRSSIISAGYGVLHAHFVYRYLVLFNQQLL 123


>U80842-11|AAB37941.2|  231|Caenorhabditis elegans Hypothetical
           protein ZC239.4 protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 103 FTNILISGMFTILNF--KYVHRYSIYNCSLLCCQWKTSLVIK 222
           F N+ I   F    F  KY H++ IY    +C +W   ++ K
Sbjct: 148 FPNMSIPDGFNAYKFVEKYSHQFHIYFKGCICLEWSARIIPK 189


>Z54281-4|CAA91049.1|  199|Caenorhabditis elegans Hypothetical
           protein F46C5.7 protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 64  FDKLVPYSNLLIIFTNILISGMFTILNFKYVHRYSIYNCSLL 189
           F +L+ Y   +I F  I+ S +F +L  ++    S+YNC  L
Sbjct: 48  FAELIFYDCFVIFFLMIIASFVFVLLYLEFYFG-SVYNCPAL 88


>AF025468-7|AAB71044.1|  248|Caenorhabditis elegans Hypothetical
           protein T27A1.3 protein.
          Length = 248

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 454 NYHINFFFTGMK---CLVLFPYLTIKENFLLLLKYISIHN 344
           NY+INFF T  K    L   PY T +E    L+ Y+SI N
Sbjct: 132 NYYINFFCTNYKKENKLPCMPYKTSQE----LISYLSILN 167


>Z81497-6|CAB04082.2|  604|Caenorhabditis elegans Hypothetical
           protein F10C2.3 protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 111 VSKY-DQQI*IGDQFIKYGCACALFLE 34
           ++KY +Q + + DQF++  C C+ FLE
Sbjct: 575 INKYGNQSLCVQDQFLRKLCFCSTFLE 601


>Z75953-5|CAB00102.2|  604|Caenorhabditis elegans Hypothetical
           protein F10C2.3 protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 111 VSKY-DQQI*IGDQFIKYGCACALFLE 34
           ++KY +Q + + DQF++  C C+ FLE
Sbjct: 575 INKYGNQSLCVQDQFLRKLCFCSTFLE 601


>AF024503-5|AAG24096.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein246 protein.
          Length = 330

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 88  NLLIIFTNILISGMFTILNFKYVHR-YSIYNCSLLCCQWKTSLVIKCIQIYTS 243
           N +I+F    +SG+++ L    VH  Y  +  +LLCC  K    + C +  TS
Sbjct: 273 NNIILFP-FYLSGVWSTLIMLIVHSPYRKFTRNLLCCSKKQRKQLGCPRTVTS 324


>AF016664-10|AAB66064.3|  330|Caenorhabditis elegans Serpentine
           receptor, class i protein37 protein.
          Length = 330

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 433 FTGMKCLVLFPYLTIKENFLLL 368
           F G+ C++LF Y+TI + FLLL
Sbjct: 199 FGGVSCILLFSYITI-DLFLLL 219


>AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical
           protein C16C4.7 protein.
          Length = 361

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
 Frame = -3

Query: 448 HINFFFTGMKCLVLFPYLT----IKENFLLLLKYI-SIHNFLISELFLYCYFRTEVSM*I 284
           HI+ F + +  + +F + T    +  + +++  ++ ++HNF+  +LFL   FR  V++ +
Sbjct: 190 HISIFDSNIPFMAVFQHSTCQAIVSNSLIIVFLFLGTLHNFIFEKLFL---FRNPVTIPL 246

Query: 283 K 281
           K
Sbjct: 247 K 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,682,032
Number of Sequences: 27780
Number of extensions: 186974
Number of successful extensions: 453
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)