Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_O10
         (402 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF136170-1|AAP97260.1|   63|Homo sapiens cytochrome c oxidase VI...    50   3e-06
X16560-1|CAA34559.1|   63|Homo sapiens protein ( Human COX VIIc ...    47   2e-05
BT007098-1|AAP35762.1|   63|Homo sapiens cytochrome c oxidase su...    47   2e-05
BC007498-1|AAH07498.1|   63|Homo sapiens cytochrome c oxidase su...    47   2e-05
BC001005-1|AAH01005.1|   63|Homo sapiens cytochrome c oxidase su...    47   2e-05
AF067639-1|AAC73062.1|   63|Homo sapiens cytochrome c oxidase su...    47   2e-05
BC104924-1|AAI04925.1|  333|Homo sapiens G protein-coupled recep...    31   1.1  
BC104922-1|AAI04923.1|  333|Homo sapiens putative purinergic rec...    31   1.1  
AY242133-1|AAO92300.1|  333|Homo sapiens putative purinergic rec...    31   1.1  
AL590222-1|CAD13458.1|  333|Homo sapiens G protein-coupled recep...    31   1.1  
AB083599-1|BAB89312.1|  333|Homo sapiens putative G-protein coup...    31   1.1  
BC002810-1|AAH02810.1|  554|Homo sapiens zinc finger protein 205...    30   2.5  
AF060865-1|AAC70007.1|  504|Homo sapiens zinc finger protein ZNF...    30   2.5  
BC104878-1|AAI04879.1|  527|Homo sapiens ZIM2 protein protein.         29   7.7  
BC104876-1|AAI04877.1|  527|Homo sapiens ZIM2 protein protein.         29   7.7  
AF166122-1|AAF61478.1|  527|Homo sapiens Kruppel-type zinc-finge...    29   7.7  

>AF136170-1|AAP97260.1|   63|Homo sapiens cytochrome c oxidase VIIc
           protein.
          Length = 63

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -1

Query: 258 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPXLXTRHQLTEE 88
           R   T+ VR +H   G PG+NLPF + N+++L     +Y GSG +AP    RHQL ++
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRHQLLKK 63


>X16560-1|CAA34559.1|   63|Homo sapiens protein ( Human COX VIIc
           gene for subunit VIIc of cytochrome c oxidase (EC
           1.9.3.1).  ).
          Length = 63

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 258 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPXLXTRHQL 97
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P L  RHQL
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQL 60


>BT007098-1|AAP35762.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 258 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPXLXTRHQL 97
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P L  RHQL
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQL 60


>BC007498-1|AAH07498.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 258 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPXLXTRHQL 97
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P L  RHQL
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQL 60


>BC001005-1|AAH01005.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 258 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPXLXTRHQL 97
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P L  RHQL
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQL 60


>AF067639-1|AAC73062.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc precursor protein.
          Length = 63

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 258 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPXLXTRHQL 97
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P L  RHQL
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQL 60


>BC104924-1|AAI04925.1|  333|Homo sapiens G protein-coupled receptor
           174 protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 200 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFAKSTVGIL 379
           F PG+    ++L K+V  +    F + +S V  F FL +  R+H  KQK+D   S  G L
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAGWL 143


>BC104922-1|AAI04923.1|  333|Homo sapiens putative purinergic
           receptor FKSG79 protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 200 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFAKSTVGIL 379
           F PG+    ++L K+V  +    F + +S V  F FL +  R+H  KQK+D   S  G L
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAGWL 143


>AY242133-1|AAO92300.1|  333|Homo sapiens putative purinergic
           receptor protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 200 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFAKSTVGIL 379
           F PG+    ++L K+V  +    F + +S V  F FL +  R+H  KQK+D   S  G L
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAGWL 143


>AL590222-1|CAD13458.1|  333|Homo sapiens G protein-coupled receptor
           174 protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 200 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFAKSTVGIL 379
           F PG+    ++L K+V  +    F + +S V  F FL +  R+H  KQK+D   S  G L
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAGWL 143


>AB083599-1|BAB89312.1|  333|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 200 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFAKSTVGIL 379
           F PG+    ++L K+V  +    F + +S V  F FL +  R+H  KQK+D   S  G L
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAGWL 143


>BC002810-1|AAH02810.1|  554|Homo sapiens zinc finger protein 205
           protein.
          Length = 554

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 171 CNGCECRRVDSRQEYRR*NGFSRNSLPHSCPVCLKC 278
           C+ C  +R   R +     G    + PH CP+C KC
Sbjct: 394 CDRC-AKRFTRRSDLVTHQGTHTGAKPHKCPICAKC 428


>AF060865-1|AAC70007.1|  504|Homo sapiens zinc finger protein ZNF210
           protein.
          Length = 504

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 171 CNGCECRRVDSRQEYRR*NGFSRNSLPHSCPVCLKC 278
           C+ C  +R   R +     G    + PH CP+C KC
Sbjct: 344 CDRC-AKRFTRRSDLVTHQGTHTGAKPHKCPICAKC 378


>BC104878-1|AAI04879.1|  527|Homo sapiens ZIM2 protein protein.
          Length = 527

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +3

Query: 168 ACNGCECRRVDSRQEYR-R*NGFSRNSLPHSCPVCLKC 278
           AC  C+C RV SR  Y  +         P+ C +C KC
Sbjct: 465 ACQCCDCGRVFSRNSYLIQHYRTHTQERPYQCQLCGKC 502


>BC104876-1|AAI04877.1|  527|Homo sapiens ZIM2 protein protein.
          Length = 527

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +3

Query: 168 ACNGCECRRVDSRQEYR-R*NGFSRNSLPHSCPVCLKC 278
           AC  C+C RV SR  Y  +         P+ C +C KC
Sbjct: 465 ACQCCDCGRVFSRNSYLIQHYRTHTQERPYQCQLCGKC 502


>AF166122-1|AAF61478.1|  527|Homo sapiens Kruppel-type zinc-finger
           protein protein.
          Length = 527

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +3

Query: 168 ACNGCECRRVDSRQEYR-R*NGFSRNSLPHSCPVCLKC 278
           AC  C+C RV SR  Y  +         P+ C +C KC
Sbjct: 465 ACQCCDCGRVFSRNSYLIQHYRTHTQERPYQCQLCGKC 502


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,947,500
Number of Sequences: 237096
Number of extensions: 1032875
Number of successful extensions: 1826
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)