Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_O04
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   3.1  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   7.1  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   7.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   7.1  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             22   7.1  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 380 DVQTFTPHQIMIFLQELIKHPPLPLDILHTLGAEYKIDSSKN 255
           D       Q +I L + I  P +P   L  LGA Y I+S+ +
Sbjct: 26  DQDLLNKQQDVIQLLQKISQP-IPNQELQNLGASYDIESNSH 66


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 619 KSSNTSGPPIKSSRYRXNSEPFSXGTVENA 708
           K+ NT    IK+ +YR N +PF+   V N+
Sbjct: 480 KAKNTM---IKARQYRLNHKPFTYHIVVNS 506


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 619 KSSNTSGPPIKSSRYRXNSEPFSXGTVENA 708
           K+ NT    IK+ +YR N +PF+   V N+
Sbjct: 480 KAKNTM---IKARQYRLNHKPFTYHIVVNS 506


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 619 KSSNTSGPPIKSSRYRXNSEPFSXGTVENA 708
           K+ NT    IK+ +YR N +PF+   V N+
Sbjct: 106 KAKNTM---IKARQYRLNHKPFTYHIVVNS 132


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 YDRRKSSNTSGPPIK 651
           YD+R   N  GPP++
Sbjct: 23  YDKRVRPNYGGPPVE 37


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 YDRRKSSNTSGPPIK 651
           YD+R   N  GPP++
Sbjct: 23  YDKRVRPNYGGPPVE 37


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 140 VDGRTASVLCGSQNRT 187
           ++GR AS+ CG Q  T
Sbjct: 229 INGRRASLFCGLQKYT 244


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 140 VDGRTASVLCGSQNRT 187
           ++GR AS+ CG Q  T
Sbjct: 224 INGRRASLFCGLQKYT 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,099
Number of Sequences: 438
Number of extensions: 4452
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)