Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N23
         (442 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014001-1|AAH14001.2|  445|Homo sapiens UBX domain containing 8...    29   9.4  
BC006145-1|AAH06145.2|  445|Homo sapiens UBX domain containing 8...    29   9.4  
BC001069-1|AAH01069.2|  445|Homo sapiens UBX domain containing 8...    29   9.4  
AB088120-1|BAC22491.1|  445|Homo sapiens ETEA protein.                 29   9.4  
AB020694-1|BAA74910.1|  443|Homo sapiens KIAA0887 protein protein.     29   9.4  

>BC014001-1|AAH14001.2|  445|Homo sapiens UBX domain containing 8
           protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 277 FFLYQIPFKRL*FTHVSFF*YLIYFIRPSPQTS*ANKTGN 396
           ++L  +PF+   +T +  F + + FIRP P++   +  G+
Sbjct: 96  YYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGD 135


>BC006145-1|AAH06145.2|  445|Homo sapiens UBX domain containing 8
           protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 277 FFLYQIPFKRL*FTHVSFF*YLIYFIRPSPQTS*ANKTGN 396
           ++L  +PF+   +T +  F + + FIRP P++   +  G+
Sbjct: 96  YYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGD 135


>BC001069-1|AAH01069.2|  445|Homo sapiens UBX domain containing 8
           protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 277 FFLYQIPFKRL*FTHVSFF*YLIYFIRPSPQTS*ANKTGN 396
           ++L  +PF+   +T +  F + + FIRP P++   +  G+
Sbjct: 96  YYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGD 135


>AB088120-1|BAC22491.1|  445|Homo sapiens ETEA protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 277 FFLYQIPFKRL*FTHVSFF*YLIYFIRPSPQTS*ANKTGN 396
           ++L  +PF+   +T +  F + + FIRP P++   +  G+
Sbjct: 96  YYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGD 135


>AB020694-1|BAA74910.1|  443|Homo sapiens KIAA0887 protein protein.
          Length = 443

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 277 FFLYQIPFKRL*FTHVSFF*YLIYFIRPSPQTS*ANKTGN 396
           ++L  +PF+   +T +  F + + FIRP P++   +  G+
Sbjct: 94  YYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGD 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,328,364
Number of Sequences: 237096
Number of extensions: 894413
Number of successful extensions: 812
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)