Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N19
         (450 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...   120   7e-28
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...   120   7e-28
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...   120   7e-28
BT011182-1|AAR88543.1|  391|Drosophila melanogaster RE40459p pro...    28   5.0  
AE014134-3322|AAF53949.2|  388|Drosophila melanogaster CG9272-PA...    28   5.0  

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score =  120 bits (290), Expect = 7e-28
 Identities = 66/129 (51%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -2

Query: 389 MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 213
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 16  MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 75

Query: 212 XXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQYNRRFVNVVQT 33
               L +P+LGGKVHGSLARAGKVKGQTPKVE       KTGRAKRRIQYNRRFVN VQ 
Sbjct: 76  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 135

Query: 32  FGRRRGPNA 6
           FGRRRGPNA
Sbjct: 136 FGRRRGPNA 144


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score =  120 bits (290), Expect = 7e-28
 Identities = 66/129 (51%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -2

Query: 389 MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 213
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 212 XXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQYNRRFVNVVQT 33
               L +P+LGGKVHGSLARAGKVKGQTPKVE       KTGRAKRRIQYNRRFVN VQ 
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 120

Query: 32  FGRRRGPNA 6
           FGRRRGPNA
Sbjct: 121 FGRRRGPNA 129


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score =  120 bits (290), Expect = 7e-28
 Identities = 66/129 (51%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -2

Query: 389 MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 213
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 212 XXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQYNRRFVNVVQT 33
               L +P+LGGKVHGSLARAGKVKGQTPKVE       KTGRAKRRIQYNRRFVN VQ 
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 120

Query: 32  FGRRRGPNA 6
           FGRRRGPNA
Sbjct: 121 FGRRRGPNA 129


>BT011182-1|AAR88543.1|  391|Drosophila melanogaster RE40459p
           protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 51  CQRCADLRTSSRTQR 7
           C RCADL+  S+TQR
Sbjct: 187 CHRCADLKADSKTQR 201


>AE014134-3322|AAF53949.2|  388|Drosophila melanogaster CG9272-PA
           protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 51  CQRCADLRTSSRTQR 7
           C RCADL+  S+TQR
Sbjct: 182 CHRCADLKADSKTQR 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,215,197
Number of Sequences: 53049
Number of extensions: 315108
Number of successful extensions: 755
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)