Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N18
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    333   2e-93
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.6  
DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor...    23   5.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   5.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.5  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  333 bits (818), Expect = 2e-93
 Identities = 165/168 (98%), Positives = 165/168 (98%)
 Frame = -3

Query: 537 IXKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 358
           I KESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 357 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 178
           FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKA
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180

Query: 177 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 34
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score =  306 bits (752), Expect = 2e-85
 Identities = 151/160 (94%), Positives = 155/160 (96%)
 Frame = -3

Query: 489 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 310
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 309 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 130
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 129 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*FHIQSV 10
           FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM   ++++
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 298  FFLNVVV*QGASVFQLLASKDETLLIRRNSF 390
            FF+  V+  G  VF  +A  DET + R N+F
Sbjct: 1320 FFIYAVI--GMQVFGKIAMDDETSIHRNNNF 1348



 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 70   FLLNIVVGQCASVFQLLASKDETLLIRRNSF 162
            F +  V+G    VF  +A  DET + R N+F
Sbjct: 1320 FFIYAVIGM--QVFGKIAMDDETSIHRNNNF 1348


>DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 257 CMPPRRRSTRWSV 295
           C PP RR+ RW V
Sbjct: 34  CWPPDRRTRRWYV 46



 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 485 CMPPRRRSTRWSV 523
           C PP RR+ RW V
Sbjct: 34  CWPPDRRTRRWYV 46


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/22 (31%), Positives = 18/22 (81%)
 Frame = +1

Query: 223 DRLSCQSFHEDLHASTKTQYQM 288
           DRL+ ++FH DL+++ + ++++
Sbjct: 292 DRLAQRAFHTDLYSTFRDEFKV 313



 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = +1

Query: 451 DGLSSQSFHEDLHASTKTQYKM 516
           D L+ ++FH DL+++ + ++K+
Sbjct: 292 DRLAQRAFHTDLYSTFRDEFKV 313


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -3

Query: 393 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 271
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628



 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -3

Query: 165 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 43
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,170
Number of Sequences: 2352
Number of extensions: 11583
Number of successful extensions: 124
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)