Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_N14
(315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-10|CAC48129.1| 106|Caenorhabditis elegans Hypothetical... 56 4e-09
Z81120-6|CAH10814.1| 98|Caenorhabditis elegans Hypothetical pr... 48 1e-06
U88168-2|AAC24398.1| 108|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.13
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 28 1.2
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 28 1.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 26 5.0
AF043700-7|AAB97573.2| 165|Caenorhabditis elegans Hypothetical ... 26 6.6
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 25 8.7
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 25 8.7
>AL132876-10|CAC48129.1| 106|Caenorhabditis elegans Hypothetical
protein Y105E8A.11 protein.
Length = 106
Score = 56.4 bits (130), Expect = 4e-09
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = -1
Query: 210 CSIEEVTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKT 43
C+ EV D S+GCG+ F V++ + FKGK +A+H+ V ++L+E++K +H T KT
Sbjct: 48 CTRVEVHDVSNGCGSMFDVVVEAAGFKGKSKVAQHKQVTSILREQIKDMHGLTIKT 103
>Z81120-6|CAH10814.1| 98|Caenorhabditis elegans Hypothetical
protein T12D8.10 protein.
Length = 98
Score = 48.0 bits (109), Expect = 1e-06
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -1
Query: 213 KCSIEEVTDESDGC-GAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFT 52
K I +V DES GC G KF +LIVS+ F+GK L HRLV L + HA T
Sbjct: 17 KPQILKVVDESGGCDGYKFRLLIVSEAFEGKCTLQSHRLVQAALAPIMDETHALT 71
>U88168-2|AAC24398.1| 108|Caenorhabditis elegans Hypothetical
protein K11H12.1 protein.
Length = 108
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 177 GCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEEL-KTIHA 58
G F V +VSD+F+GK ++ RHRLVNT L +EL T+HA
Sbjct: 40 GAEKHFRVQVVSDEFEGKRVIERHRLVNTCLAKELATTVHA 80
>Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical
protein T05E11.4 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 10 HYCVFH*STD*GFLGERVDCLQFLLKQCVHQSMPGKKRFPFELVRYYENRKLGAASVALI 189
H+C+ + + G L + CL + + K+ +E Y N+K +S+ I
Sbjct: 79 HFCLRYTAKRKGKLDRDLHCLHQVYDLLENDKRSTKRELYYEHKAVYGNQKYLDSSIKSI 138
Query: 190 CHLLNRALSN 219
C LLN + +N
Sbjct: 139 CELLNESRAN 148
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 55 ERVDCLQFLLKQCVHQSMPGKKRF 126
+++ Q+LL+QCV S G++RF
Sbjct: 353 QQIHSAQYLLQQCVRNSTQGRERF 376
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 55 ERVDCLQFLLKQCVHQSMPGKKRF 126
+++ Q+LL+QCV S G++RF
Sbjct: 370 QQIHSAQYLLQQCVRNSTQGRERF 393
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 248 NQHDRSARGRGRPTTHRPAEF 310
N HDR A RP HRPA +
Sbjct: 199 NSHDRRALRARRPMVHRPAPY 219
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 201 EEVTDESDGCGAKFSVLIVSDKFKGKP 121
EE+ GCG+ V I D+F G P
Sbjct: 92 EEIEQHFHGCGSVSRVTIQCDRFSGHP 118
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical
protein T20G5.1 protein.
Length = 1681
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -1
Query: 171 GAKFSVLIVSDKFKGKPLLARHRLVNTLLQ 82
GAKF+ L+VS+ G+PL ++++ ++
Sbjct: 528 GAKFAQLLVSESENGEPLADLSQIIDCFME 557
>AF043700-7|AAB97573.2| 165|Caenorhabditis elegans Hypothetical
protein K09H9.7 protein.
Length = 165
Score = 25.8 bits (54), Expect = 6.6
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 SSTDQQIKVFWVNAWIVFXXXXXNVFTNL-CLARRGFPLNLSDTMRTENL-APHPSLSSV 193
S+ D V NAWI F FTNL LA G ++ + N P P +
Sbjct: 3 STADSGTFVAKFNAWIDFIGSKKAFFTNLKILAENGIHESVIRALVLHNAKLPIPKCVAT 62
Query: 194 TSSIE 208
SS+E
Sbjct: 63 ESSVE 67
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 100 QSMPGKKRFPFELVRYYENRKLGAASVALI 189
Q +P KKR FEL R N K+GA V L+
Sbjct: 18 QPVPHKKR-KFELGRPAANTKIGAHRVRLV 46
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 61 VDCLQFLLKQ--CVHQSMPGKKRFPFELV 141
++CL+FLLKQ HQ M +K F F+L+
Sbjct: 1305 IECLRFLLKQKHDTHQLMEDRK-FIFDLM 1332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,875,082
Number of Sequences: 27780
Number of extensions: 121077
Number of successful extensions: 267
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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