Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N13
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    31   0.91 
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 540 THCESS*ERGNPCCRRPSAASRGDAV 617
           THCE     GN CC  P A++  DA+
Sbjct: 253 THCEKERRDGNKCCSGPLASTMRDAM 278


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 540 THCESS*ERGNPCCRRPSAASRGDAV 617
           THCES    GN CC    AA+  DA+
Sbjct: 269 THCESGKRDGNKCCDARLAATMRDAM 294


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 526 GEESRLTASLAERGEILAVVDLRRRHVVTLY 618
           GEES+L  SLA +  I  V+ +  R   TLY
Sbjct: 81  GEESKLIESLAAQNNIHIVIGVVEREASTLY 111


>AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical
           protein F21E9.5 protein.
          Length = 864

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 319 DESSPFTPFHRNMSIPRQR 375
           D S+ FTPFH+N+++P  R
Sbjct: 502 DCSTTFTPFHKNVTVPVTR 520


>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
           protein D2013.8a protein.
          Length = 1087

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 40  LFTVPSLHLSTQ-THXIKCKGYFFTKYY 120
           ++T PSL +S++  H +  +GY  TKYY
Sbjct: 356 VYTSPSLDVSSRIAHGLSQEGYKLTKYY 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,858,563
Number of Sequences: 27780
Number of extensions: 281605
Number of successful extensions: 536
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)