Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N08
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   1.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.9  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      23   3.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 5   LLFXLPSLCPALNSHMHPLFSKXFGPLFQHXI---XCXLKNNTL 127
           +LF L     A+N  ++ LFSK F   F+  I    C  + NTL
Sbjct: 46  VLFWLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTL 89


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 5   LLFXLPSLCPALNSHMHPLFSKXFGPLFQHXI---XCXLKNNTL 127
           +LF L     A+N  ++ LFSK F   F+  I    C  + NTL
Sbjct: 494 VLFWLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTL 537


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 5  LLFXLPSLCPALNSHMHPL 61
          +L  +PS C A+++ M PL
Sbjct: 22 ILLIIPSKCEAVSNDMQPL 40


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 525 FSKLKMMSSSQTLPKYLS 578
           FSKL    S   L KYLS
Sbjct: 14  FSKLSSSDSKSLLKKYLS 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,355
Number of Sequences: 438
Number of extensions: 2983
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)