Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N05
         (530 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    64   9e-13
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    41   9e-06
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    35   5e-04
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   4.5  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              21   7.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 64.1 bits (149), Expect = 9e-13
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
 Frame = -2

Query: 529 ETLRISTVASMGIPHMALNDAKL--GNYIIPKGTFILLSLYELHHGPH-WKDPETFRPER 359
           ETLR+     + I      D KL  G+Y IP G  +++  ++LH  PH + +P+ F P+ 
Sbjct: 406 ETLRMYPPVPL-IAREIKTDLKLASGDYTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDN 464

Query: 358 FLTKEGNILQDEWLIPFGIGKRRCIGEGLARSELFMFLTHILQKFHLRIPKNEPLPSTEP 179
           FL ++         +PF  G R C+G   A  +L + L+ IL+ F +R    E     + 
Sbjct: 465 FLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSDVKESEFRLQ- 523

Query: 178 IDGLSLSAKQFRIIFEPRKTFKS 110
            D +   A  F+I  EPRK   S
Sbjct: 524 ADIILKRADGFKIRLEPRKQVAS 546


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 40.7 bits (91), Expect = 9e-06
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
 Frame = -2

Query: 529 ETLRISTVASM----GIPHMALNDAKLGNYIIPKGTFILLSLYELHHGPH-WKDPETFRP 365
           ETLR+   AS+     I     ND K+    IPK   I +  + +H     + +P++F P
Sbjct: 362 ETLRMYPPASILMRKAISDYTFNDTKI---TIPKEMKIWIPAFAIHRDSAIYPNPDSFDP 418

Query: 364 ERFLTKEGNILQDEWLIPFGIGKRRCIGEGLARSELFMFLTHILQKFHLRIPKNEPLP 191
           ERF             +PFG G R CIG   A  +  + L  IL+   + + +   +P
Sbjct: 419 ERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKVEVCEKTIIP 476


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 35.1 bits (77), Expect = 5e-04
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = -2

Query: 466 KLGNYIIPKGTFILLSLYELH-HGPHWKDPETFRPERFLTKEGNILQDEWLIPFGIGKRR 290
           +L  Y +  GT +LL  +    +  ++KD + + PER+ T          + PFG G+R 
Sbjct: 407 ELSGYRLTAGTVVLLHTWIAGLNEENFKDAKKYLPERWTTPT-TPHSPLLVAPFGAGRRI 465

Query: 289 CIGEGLARSELFMFLTHILQKFHL 218
           C G+      L + L  I+++F +
Sbjct: 466 CPGKRFVDLALQLILAKIIREFEI 489


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 443 KGDFYFIVTVRAASRTTLERSRN 375
           +G+FYF +  +  +R  LER  N
Sbjct: 254 RGEFYFFLHKQVLNRYYLERLSN 276


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 443 KGDFYFIVTVRAASRTTLERSRN 375
           +G+FYF +  +  +R  LER  N
Sbjct: 254 RGEFYFFLHKQVLNRYYLERLSN 276


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +3

Query: 243 VRNMKSSERANPSPIQRRFPIPKGMSHSSCKMLPSLVRNRSGRNVSGSF 389
           +RN+ SS    P P++     P          LP ++ ++ G+ V+  F
Sbjct: 215 LRNVHSSSFCIPLPVRVLPNFPSSGHWQDQMSLPQMLADKIGKMVNQKF 263


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 476 ESHMRYAHRCDSRYPQSF 529
           E H +Y   CD  YP  F
Sbjct: 209 ERHKKYYPCCDEPYPDIF 226


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 410 AASRTTLERSRNIPTGTI 357
           AAS ++LE+S  +P G +
Sbjct: 5   AASSSSLEKSYELPDGQV 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,283
Number of Sequences: 438
Number of extensions: 3511
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)