Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N02
         (646 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E824F6 Cluster: PREDICTED: similar to CG7709-PA;...    33   5.9  
UniRef50_Q9PQ33 Cluster: Phenylalanyl-tRNA synthetase beta chain...    33   5.9  
UniRef50_A3I1T1 Cluster: Phosphoenolpyruvate carboxylase; n=1; A...    33   7.8  

>UniRef50_UPI0000E824F6 Cluster: PREDICTED: similar to CG7709-PA;
           n=1; Gallus gallus|Rep: PREDICTED: similar to CG7709-PA
           - Gallus gallus
          Length = 101

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 285 CLPLWTLLRPRLKKGCHRA-QEKPWFIPKP 371
           CLP+WTL  P L++G   A Q  PW +P P
Sbjct: 29  CLPVWTLGPPSLRQGPPNASQYGPWDLPVP 58


>UniRef50_Q9PQ33 Cluster: Phenylalanyl-tRNA synthetase beta chain;
           n=1; Ureaplasma parvum|Rep: Phenylalanyl-tRNA synthetase
           beta chain - Ureaplasma parvum (Ureaplasma urealyticum
           biotype 1)
          Length = 772

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -2

Query: 237 VLNIMNHMFVYHKNKIVNCIFDNSFYKISNCNRQYFYYV 121
           +L  +N  + Y KN +VN ++DN+   + N N+Q F ++
Sbjct: 612 LLTKLNIDYAYDKNHVVNELYDNNQLALINANKQVFGFI 650


>UniRef50_A3I1T1 Cluster: Phosphoenolpyruvate carboxylase; n=1;
           Algoriphagus sp. PR1|Rep: Phosphoenolpyruvate
           carboxylase - Algoriphagus sp. PR1
          Length = 844

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = -2

Query: 411 YSELLDILFAAYHSALE*TMVFPERDDIPSSNEV*EESIAV 289
           Y +  +I++A YH +++   +  E D++   N+V ++SIA+
Sbjct: 756 YGQFWEIMYAEYHKSIDKLKLVSEMDELMGDNQVSKKSIAI 796


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,202,210
Number of Sequences: 1657284
Number of extensions: 10508495
Number of successful extensions: 23435
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23430
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)