Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_N02
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-26|CAA19455.2|  431|Caenorhabditis elegans Hypothetical...    30   1.6  
AL023828-12|CAA19456.1|  492|Caenorhabditis elegans Hypothetical...    30   1.6  
U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>AL023828-26|CAA19455.2|  431|Caenorhabditis elegans Hypothetical
           protein Y17G7B.10a protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +1

Query: 169 IVKYTINDFVFMINKHMIHDVENTSSLTDISKTGIKSSHVYRYGLFSDLV*RRDVIALRK 348
           ++K   +D+  +++KH IH     +   ++   GI+S  V R+G   + V   D +    
Sbjct: 63  LLKKRGSDYGRLLSKHKIHHSYLNTLQRELENAGIESRLVRRFGYTQEAVDWADAVFSAG 122

Query: 349 NHGSF--QSRMVRSK 387
             G+F   S  VR+K
Sbjct: 123 GDGTFLMASSRVRTK 137


>AL023828-12|CAA19456.1|  492|Caenorhabditis elegans Hypothetical
           protein Y17G7B.10b protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +1

Query: 169 IVKYTINDFVFMINKHMIHDVENTSSLTDISKTGIKSSHVYRYGLFSDLV*RRDVIALRK 348
           ++K   +D+  +++KH IH     +   ++   GI+S  V R+G   + V   D +    
Sbjct: 124 LLKKRGSDYGRLLSKHKIHHSYLNTLQRELENAGIESRLVRRFGYTQEAVDWADAVFSAG 183

Query: 349 NHGSF--QSRMVRSK 387
             G+F   S  VR+K
Sbjct: 184 GDGTFLMASSRVRTK 198


>U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical
           protein F55F8.3 protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 231 NIMNHMFVYHKNKIVNCIF-DNSFYKISNCNR 139
           N+  H    HK  IVNC F  NS+  I+ C R
Sbjct: 180 NLFIHPLASHKGYIVNCQFMKNSYDMITVCKR 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,643,663
Number of Sequences: 27780
Number of extensions: 266483
Number of successful extensions: 597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)