Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M18
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.57 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.57 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.3  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   7.0  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 428 MAMFIAA*ACYR*YSRTMYHKMLIEKRHLLVFYL-VFITVA-ELSLIIN 288
           +   IAA   Y  Y R  Y++ L    HL++ YL  F+ VA    +I+N
Sbjct: 50  LVSIIAAGTAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAFQVILN 98


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 428 MAMFIAA*ACYR*YSRTMYHKMLIEKRHLLVFYL-VFITVA-ELSLIIN 288
           +   IAA   Y  Y R  Y++ L    HL++ YL  F+ VA    +I+N
Sbjct: 50  LVSIIAAGTAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAFQVILN 98


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 417 KHSHPPRWLRQ 449
           K SHPP+W  Q
Sbjct: 49  KKSHPPQWTWQ 59


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 484 TVSFFGSGILAYFTRTS 534
           T  FFG+ IL+Y  + S
Sbjct: 373 TFGFFGTHILSYINKAS 389


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 514 PGCQNQRKKRLFYHKKRS*SPGCRS 440
           P C+N   + L   K+ + S GC++
Sbjct: 14  PECENPETELLVSTKRSTISQGCKA 38


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 243 LCLSYITCIFA 275
           LCL Y TC+++
Sbjct: 7   LCLVYATCVYS 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,003
Number of Sequences: 336
Number of extensions: 2247
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)