Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M17
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113619-1|AAM29624.1|   65|Drosophila melanogaster RH67809p pro...    29   4.4  
AE014298-1043|AAF46262.2|   65|Drosophila melanogaster CG11368-P...    29   4.4  
AY119070-1|AAM50930.1|  157|Drosophila melanogaster LP08443p pro...    29   7.7  
AE013599-3681|AAF47057.1|  157|Drosophila melanogaster CG11300-P...    29   7.7  

>AY113619-1|AAM29624.1|   65|Drosophila melanogaster RH67809p
           protein.
          Length = 65

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 263 PTAGHRPS-PMPST*CGPPPSAS 198
           P +G RPS P P   CGPPPS +
Sbjct: 38  PPSGPRPSGPPPGGRCGPPPSTT 60


>AE014298-1043|AAF46262.2|   65|Drosophila melanogaster CG11368-PA
           protein.
          Length = 65

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 263 PTAGHRPS-PMPST*CGPPPSAS 198
           P +G RPS P P   CGPPPS +
Sbjct: 38  PPSGPRPSGPPPGGRCGPPPSTT 60


>AY119070-1|AAM50930.1|  157|Drosophila melanogaster LP08443p
           protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = -3

Query: 263 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTWLEDAPRSLYPAGEKMRD 105
           P AG   SP P+T   P PS +   PP A     T     P +  P+     D
Sbjct: 34  PPAGTPTSPPPATGTPPSPSPATGTPPSASPAAGTPTSPTPATGTPSSPATPD 86


>AE013599-3681|AAF47057.1|  157|Drosophila melanogaster CG11300-PA
           protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = -3

Query: 263 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTWLEDAPRSLYPAGEKMRD 105
           P AG   SP P+T   P PS +   PP A     T     P +  P+     D
Sbjct: 34  PPAGTPTSPPPATGTPPSPSPATGTPPSASPAAGTPTSPTPATGTPSSPATPD 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,472,427
Number of Sequences: 53049
Number of extensions: 469686
Number of successful extensions: 1343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)