Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M16
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.77 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.77 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.2  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +1

Query: 412 LTSMSLHNICTIWIIFSKIGQFTINI*KLLISESIHNLFRF*KSK 546
           L + +LH  C ++++      + +++   L  + ++NLFR  +S+
Sbjct: 166 LQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESE 210


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +1

Query: 412 LTSMSLHNICTIWIIFSKIGQFTINI*KLLISESIHNLFRF*KSK 546
           L + +LH  C ++++      + +++   L  + ++NLFR  +S+
Sbjct: 166 LQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESE 210


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 302 NSIVSIFFHSVLPVQ 258
           N+ + + FHSVLP++
Sbjct: 158 NTTIFLIFHSVLPIK 172


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 643 MLIRNISVRTLNLKH 599
           MLIRNI++ +L L H
Sbjct: 325 MLIRNINLFSLQLAH 339


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 643 MLIRNISVRTLNLKH 599
           MLIRNI++ +L L H
Sbjct: 150 MLIRNINLFSLQLAH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,702
Number of Sequences: 336
Number of extensions: 2754
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)