Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M16
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058416-1|AAL13645.1|  754|Drosophila melanogaster GH19286p pro...    29   6.0  
AE014296-870|AAN11608.1|  754|Drosophila melanogaster CG11353-PB...    29   6.0  
AE014296-869|AAF47917.1|  754|Drosophila melanogaster CG11353-PA...    29   6.0  

>AY058416-1|AAL13645.1|  754|Drosophila melanogaster GH19286p
           protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +1

Query: 385 VMKNILSDILTSMSLHNICTIWI-IFSKIG--QFTINI*KLLISESIHNLFRF*KSKLFI 555
           + +N  ++I     L ++C IWI +F  +    FT++   +LIS +    F++  S   +
Sbjct: 341 IRENTANEIPLMNGLRSVCAIWIMVFHVVWFMYFTVHNKTVLISYAEQAFFQYVSSAPLL 400

Query: 556 IPNYYILGQYAV*FNVL 606
           +  ++ +  +   FN L
Sbjct: 401 VDVFFTISGFLQTFNFL 417


>AE014296-870|AAN11608.1|  754|Drosophila melanogaster CG11353-PB,
           isoform B protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +1

Query: 385 VMKNILSDILTSMSLHNICTIWI-IFSKIG--QFTINI*KLLISESIHNLFRF*KSKLFI 555
           + +N  ++I     L ++C IWI +F  +    FT++   +LIS +    F++  S   +
Sbjct: 341 IRENTANEIPLMNGLRSVCAIWIMVFHVVWFMYFTVHNKTVLISYAEQAFFQYVSSAPLL 400

Query: 556 IPNYYILGQYAV*FNVL 606
           +  ++ +  +   FN L
Sbjct: 401 VDVFFTISGFLQTFNFL 417


>AE014296-869|AAF47917.1|  754|Drosophila melanogaster CG11353-PA,
           isoform A protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +1

Query: 385 VMKNILSDILTSMSLHNICTIWI-IFSKIG--QFTINI*KLLISESIHNLFRF*KSKLFI 555
           + +N  ++I     L ++C IWI +F  +    FT++   +LIS +    F++  S   +
Sbjct: 341 IRENTANEIPLMNGLRSVCAIWIMVFHVVWFMYFTVHNKTVLISYAEQAFFQYVSSAPLL 400

Query: 556 IPNYYILGQYAV*FNVL 606
           +  ++ +  +   FN L
Sbjct: 401 VDVFFTISGFLQTFNFL 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,239,122
Number of Sequences: 53049
Number of extensions: 413191
Number of successful extensions: 679
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)