Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M16
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL023835-15|CAA19492.2|  520|Caenorhabditis elegans Hypothetical...    28   7.2  

>Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical
           protein ZC455.7 protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 503 ISSFQILIVNCPILEKMIHIVHILCKDIEVRISLR 399
           ISSF   + NC I ++ +H V    +DI+  +S+R
Sbjct: 158 ISSFLTFLYNCRINKRTLHFVETRNRDIKFDLSVR 192


>Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical
           protein T01D3.4 protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 379 LFVMKNILSDILTSMSLHNICTIWIIFSKIGQFTINI*KLLISESIHNL 525
           LF+ ++++ D L  + L N C  + + S +GQF I    LL   S   L
Sbjct: 223 LFI-QSVIQDCLYGLDLLNSCNFFSVHSVLGQFFIYTFSLLFVHSADGL 270


>AL023835-15|CAA19492.2|  520|Caenorhabditis elegans Hypothetical
           protein Y37A1B.9 protein.
          Length = 520

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = -3

Query: 492 SNIDSK-LSDFRENDPYCTYIVQRH*GEDITKNIFHYKQFFLNL*GMKCLLMVSHNKVSI 316
           S + SK + DF  N      I+  +   D++++    K+ F NL  +   L V ++ ++ 
Sbjct: 45  SEVTSKTIKDFPSNCEIVCGILNFNSNTDLSED--QLKKVFQNLKELDGDLKVENSNLTS 102

Query: 315 ASIKKFYSINFFSFSVTSSMPLILLRHVTIL 223
            S    Y  NF  ++  S +   LL HV IL
Sbjct: 103 LSFFSSYDFNFCYYTGISIINNSLLEHVDIL 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,693,889
Number of Sequences: 27780
Number of extensions: 241764
Number of successful extensions: 479
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)