Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M14
         (535 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0361 - 22711200-22712180,22712523-22712729,22715205-227159...    27   7.2  
01_01_1202 - 9681836-9683146                                           27   9.5  

>11_06_0361 -
           22711200-22712180,22712523-22712729,22715205-22715903,
           22717848-22717979,22720422-22721180,22721241-22721453
          Length = 996

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 266 FSYYFFGCIFICTLYSFRVWHL*IFLVFTLCIQLYG 159
           FSYY   C+F   L SFR+      L++  C+ L+G
Sbjct: 312 FSYYHCVCMFFKELVSFRI------LLYLCCLGLFG 341


>01_01_1202 - 9681836-9683146
          Length = 436

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 228 SVLV*SLAFIDLFSVYIMYTIIWIGLNRFFLFLCRCT*YCPLKP 97
           SVLV   A  DL +VY  Y  I  GL    + L  C    P  P
Sbjct: 362 SVLVGRAAMYDLMTVYACYLAIIAGLGCTLILLSICKHALPALP 405


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,847,978
Number of Sequences: 37544
Number of extensions: 180067
Number of successful extensions: 250
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)