Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M14
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    26   0.91 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   4.9  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
 Frame = -3

Query: 413 KYTTDFSFRLLVXIXKDEISFCTCLI-----ITIDVRXTNCINYRQLSNEMS*FFSYYFF 249
           KY TD   R  + I     +F T L      +  D R   C+ YR  +  +   ++Y FF
Sbjct: 169 KYVTDKLIRKSIFILWGIGAFITFLPLFGFGVYFDERKQTCVRYRSATEPIDVAYAYLFF 228

Query: 248 --GCIFICTLYSFRV 210
             G +  C+ +  R+
Sbjct: 229 AVGKLPSCSCWVVRI 243


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 75  LSNNENGTVLVDNIKYIYTRT 137
           L+N+  G   +DNI YIY  T
Sbjct: 157 LNNDMKGHDFIDNIMYIYYGT 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,820
Number of Sequences: 2352
Number of extensions: 9360
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)