Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M08
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   5.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   7.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.2  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 232 VHHKLVQYNAIPFMKRVK 179
           V HK   Y+AIP+++ V+
Sbjct: 90  VLHKCYDYDAIPWLQNVE 107


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 347 PPKAHVFYRNEISRAPLSVLVRLCSILSFSCRRYIQFL 234
           P K  +  +  ++ AP    V + +     C+R IQF+
Sbjct: 39  PTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRKIQFM 76


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 312 LSCSSVCPCASVFNPIIFL 256
           L C  +  C  VFNP  +L
Sbjct: 222 LRCWLISKCIYVFNPRYYL 240


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -3

Query: 165 AVPIIKLLQVSKR 127
           A+P+ KLLQ+S++
Sbjct: 251 ALPVDKLLQISEK 263


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 312 LSCSSVCPCASVFNPIIFL 256
           L C  +  C  VFNP  +L
Sbjct: 222 LRCWLISKCIYVFNPRYYL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,070
Number of Sequences: 336
Number of extensions: 1572
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)