Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M08
         (374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-26|CAC48128.1|  922|Caenorhabditis elegans Hypothetical...    27   4.4  
AL132876-25|CAH04764.1|  930|Caenorhabditis elegans Hypothetical...    27   4.4  
AL132876-9|CAD21661.1|  959|Caenorhabditis elegans Hypothetical ...    27   4.4  
Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z81124-12|CAI46579.2|  489|Caenorhabditis elegans Hypothetical p...    27   5.8  
AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical ...    26   7.6  

>AL132876-26|CAC48128.1|  922|Caenorhabditis elegans Hypothetical
           protein Y105E8A.10c protein.
          Length = 922

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -2

Query: 211 YNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITAGGVG 74
           Y A+PF++R   Y+     +K    I     L  K    +  GG+G
Sbjct: 61  YEALPFVRRYFMYWMKHTFDKEKLFINTFQPLKHKPYYGVPCGGIG 106


>AL132876-25|CAH04764.1|  930|Caenorhabditis elegans Hypothetical
           protein Y105E8A.10b protein.
          Length = 930

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -2

Query: 211 YNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITAGGVG 74
           Y A+PF++R   Y+     +K    I     L  K    +  GG+G
Sbjct: 69  YEALPFVRRYFMYWMKHTFDKEKLFINTFQPLKHKPYYGVPCGGIG 114


>AL132876-9|CAD21661.1|  959|Caenorhabditis elegans Hypothetical
           protein Y105E8A.10a protein.
          Length = 959

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -2

Query: 211 YNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITAGGVG 74
           Y A+PF++R   Y+     +K    I     L  K    +  GG+G
Sbjct: 98  YEALPFVRRYFMYWMKHTFDKEKLFINTFQPLKHKPYYGVPCGGIG 143


>Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical
           protein F31C3.4 protein.
          Length = 318

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 113 VERVQRLDTCNNFIIGTAVEVVLHTLHE-RYRVVLDQLVMYQG 238
           V  + +   C  F+  T  EV+ H LH  +YR +L    +Y G
Sbjct: 262 VSSILQAIACGTFLYITTFEVIPHELHNGKYR-ILKMFFIYMG 303


>Z81124-12|CAI46579.2|  489|Caenorhabditis elegans Hypothetical
           protein T21B4.17 protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 285 HKDRQRSTRDFIAIEDVRFRRKFELQS 365
           HKD +++ ++++A + ++ R KFE  S
Sbjct: 187 HKDAEKNEQEYLAQKKIKDREKFERHS 213


>AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical
           protein F56A11.5 protein.
          Length = 340

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 208 NAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITA 86
           N +P  KR+ +  Y+     +IT   +LD LNSK   N+++
Sbjct: 194 NEVP--KRIDDTAYADLAPYMITSQASLDDLNSKLDQNVSS 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,198,927
Number of Sequences: 27780
Number of extensions: 151689
Number of successful extensions: 432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)