Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M07
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   3.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.5  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 591 NEVPYYKNINFMFYSRYKENKTG-GFATTHGHS 686
           N  PYY N++++  S    ++ G G  T+ G S
Sbjct: 254 NNYPYYSNMDYLSSSTMSHSQFGNGLETSWGKS 286


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 261 FNMSKCLEKVKPKLTTANI 205
           FN++K L+K+ P+L  A I
Sbjct: 540 FNVAKTLQKIAPQLDQAVI 558


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 238 KGKTKTHNSKHI*FLWT*SSWMLLKLY 158
           KG+ K H S +  F +  +S+ LL +Y
Sbjct: 45  KGELKQHKSDYFYFSFYITSYTLLSVY 71


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 238 KGKTKTHNSKHI*FLWT*SSWMLLKLY 158
           KG+ K H S +  F +  +S+ LL +Y
Sbjct: 45  KGELKQHKSDYFYFSFYITSYTLLSVY 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,102
Number of Sequences: 336
Number of extensions: 3722
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)