Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M07
         (742 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0676 - 19826485-19827711                                         29   3.9  
01_06_0815 - 32178886-32178972,32179065-32179209,32179221-321793...    28   9.0  

>10_08_0676 - 19826485-19827711
          Length = 408

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 571 VVGHRIGTRFLIIKILILCSIRGIKKIKLEV 663
           VV HR G+  +++K+L   S R I   KLEV
Sbjct: 296 VVAHRGGSMMVVLKVLSAFSSRNINLTKLEV 326


>01_06_0815 -
           32178886-32178972,32179065-32179209,32179221-32179386,
           32179606-32179668,32179810-32179876,32180119-32180196,
           32180315-32180447,32180759-32180829,32180956-32181017,
           32181391-32181433,32181609-32181706,32182575-32182811,
           32182880-32182955
          Length = 441

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 585 DRNEVPYYKNINFMFYSRYKENKTGGFATTHGHSVTCELIVVHFIHG 725
           +R  + Y+ +  ++F+   K+N    F   HG +V  EL+    + G
Sbjct: 201 NRESIAYFHSSTYVFFIYIKKNIKNFFQVLHGDAVLDELLDCTILSG 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,117,457
Number of Sequences: 37544
Number of extensions: 335266
Number of successful extensions: 654
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)