Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_M05
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.82 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.8  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 235 AAAYRILKQNLTSLNRILEWLVV 303
           A  YR+L  N+ + N+I  W ++
Sbjct: 157 AVLYRLLADNVANFNKIFGWSLI 179


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 168 YARLPXKGNKKIYDETTVIE 109
           YA++  +  KKI+DE+ + E
Sbjct: 99  YAKIRTENQKKIFDESVIFE 118


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 492 CSYLIIRQYNQKKHQKYFSSYTY 560
           CS+ I+R++   KH  Y+   T+
Sbjct: 17  CSHRIVREHLGLKHDNYYELETH 39


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 492 CSYLIIRQYNQKKHQKYFSSYTY 560
           CS+ I+R++   KH  Y+   T+
Sbjct: 331 CSHRIVREHLGLKHDNYYELETH 353


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 492 CSYLIIRQYNQKKHQKYFSSYTY 560
           CS+ I+R++   KH  Y+   T+
Sbjct: 564 CSHRIVREHLGLKHDNYYELETH 586


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 492 CSYLIIRQYNQKKHQKYFSSYTY 560
           CS+ I+R++   KH  Y+   T+
Sbjct: 564 CSHRIVREHLGLKHDNYYELETH 586


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 89  DNINLGVSITVVSSYIFLLPLXGRRAYG 172
           DNI  G  +  VSSY+  + L     +G
Sbjct: 256 DNIKAGYDVPAVSSYLDFINLMAYDFHG 283


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 165 HTAHLMVSGYRRPWTSAMPGAEPS 236
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,283
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)