Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_M02
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 114 8e-26
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 58 6e-09
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 57 2e-08
04_04_1339 + 32760424-32760584,32762428-32764462 54 1e-07
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 51 1e-06
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 49 3e-06
02_05_0737 - 31328473-31330513,31331015-31331184 49 5e-06
08_01_0471 - 4147170-4149207,4150535-4150692 47 2e-05
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 31 0.98
01_05_0327 + 20984336-20985478 30 2.3
08_02_1203 + 25262875-25263492,25264761-25264813,25265308-252653... 29 3.0
01_02_0031 + 10364487-10365407 29 3.0
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59... 29 3.0
11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45... 29 5.2
03_05_0943 + 29034398-29034512,29035059-29035508,29035654-29035826 29 5.2
12_01_0194 + 1441406-1441726,1442416-1442559,1443172-1443666 28 9.1
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 28 9.1
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 9.1
>04_04_0294 + 24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 114 bits (274), Expect = 8e-26
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Frame = -3
Query: 714 NAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLGNVNLEIEIG 535
+A I+S+ FWPP + E L +P + + Y K + +K R L WK +LG V LE++
Sbjct: 627 DATIISSNFWPPIQTEDLTVPASVDQLLSDYAKRFHQIKTPRKLLWKKNLGTVKLELQFE 686
Query: 534 EKKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRRKITYWQSMGLIAEK--- 364
++ + TV+P +A +IM FQ K WT L + VP+ L RKI++W S G++ E
Sbjct: 687 DRSMQFTVAPVHAAIIMQFQEKPSWTSKTLATAIGVPVDSLNRKISFWTSKGVLTESVGP 746
Query: 363 --STDHFVLVEAD---NKASVPSHQVQEMICEDEETESAMASAHDQREGELQVFWSYIV 202
F +V++ NK S + + +EE ES++AS +Q E+ V+ + +
Sbjct: 747 DADDPTFTVVDSTSDFNKNSTVNQLSERFQITEEEGESSIASVEEQLRKEMTVYEMFCI 805
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/99 (27%), Positives = 48/99 (48%)
Frame = -3
Query: 741 EELNKKFTXNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLG 562
+ELN +L+ FWP +K + LP E+ + E + + Y+ +R L+W LG
Sbjct: 502 QELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLG 561
Query: 561 NVNLEIEIGEKKLDLTVSPFNATLIMHFQNKSEWTLDEL 445
N+ + K ++L V+ + A L++ F T E+
Sbjct: 562 TCNINAKFEAKTIELIVTTYQAALLLLFNGSDRLTYSEI 600
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/101 (26%), Positives = 48/101 (47%)
Frame = -3
Query: 747 TIEELNKKFTXNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPH 568
T ELN +L+ FWP +K + LP E+ + E + + Y+ +R L+W
Sbjct: 506 THSELNPGIALAVTVLTTGFWPSYKSFDINLPAEMVKCVEVFKEFYQTRTKHRKLTWIYS 565
Query: 567 LGNVNLEIEIGEKKLDLTVSPFNATLIMHFQNKSEWTLDEL 445
LG N+ + K ++L V+ + A L++ F + E+
Sbjct: 566 LGTCNINAKFEAKTIELIVTTYQAALLLLFNGVDRLSYSEI 606
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = -3
Query: 720 TXNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLGNVNLEIE 541
T + IL+ WP +LP EI + E + Y R L+W+ ++GN +++
Sbjct: 490 TISVQILTTGSWPTQPCTPCKLPPEIVDISEKFRAFYLGTHNGRRLTWQTNMGNADIKAT 549
Query: 540 IGEKKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRR 406
G ++ +L VS + ++M F + T ++ Q +P L+R
Sbjct: 550 FGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKR 594
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/104 (23%), Positives = 51/104 (49%)
Frame = -3
Query: 738 ELNKKFTXNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLGN 559
E N N +L+ +WP +K+ + LP E+ + E + + Y + K +R L+W LGN
Sbjct: 479 ESNPLIDLNVTVLTTGYWPTYKNSDINLPLEMVKCVEVFKEYYRSDKQHRKLTWIFSLGN 538
Query: 558 VNLEIEIGEKKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKV 427
+ K ++ ++ + A L++ F + + ++ +K+
Sbjct: 539 CVVIGNFDAKPVEFVLNTYQAALLLLFNEADKLSYSDIVSQLKL 582
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/102 (23%), Positives = 52/102 (50%)
Frame = -3
Query: 705 ILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLGNVNLEIEIGEKK 526
+L+ +WP + ++LP E+ + + + + Y + R L W+ LG+ L+ E + K
Sbjct: 581 VLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGK 640
Query: 525 LDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRRKI 400
+L VS F + ++M F + + + ++ + + LRR +
Sbjct: 641 KELAVSLFQSVVLMLFNDAQKLSFLDIKESTGIEDKELRRTL 682
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = -3
Query: 741 EELNKKFTXNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLG 562
EEL T + IL+ WP LP EI + + Y R L+W+ ++G
Sbjct: 487 EELGDGPTLDVHILTTGSWPTQPCPPCNLPTEILAICDKFRTYYLGTHSGRRLTWQTNMG 546
Query: 561 NVNLEIEIGE-KKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRR 406
+++ G+ +K +L VS + ++M F + T ++ Q +P + L+R
Sbjct: 547 TADIKATFGKGQKHELNVSTYQMCVLMLFNSTDGLTYKDIEQDTAIPASDLKR 599
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = -3
Query: 720 TXNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLGNVNLEIE 541
T + IL+ WP + LP EI E + Y R L+W+ ++G +++
Sbjct: 489 TISVQILTTGSWPTQPCNTCNLPPEILGVSEMFRGFYLGTHNGRRLTWQTNMGTADIKAV 548
Query: 540 IGE-KKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRRKITYWQSMGLIAEK 364
G K +L VS + ++M F + + ++ Q +P L+R + QS+ L+ K
Sbjct: 549 FGNGSKHELNVSTYQMCVLMLFNSADCLSYRDIEQTTAIPSADLKRCL---QSLALVKGK 605
Query: 363 S 361
+
Sbjct: 606 N 606
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 31.1 bits (67), Expect = 0.98
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -3
Query: 669 ESLELPEE-IKEHFEAYTKSYEALKGNRTLSWKPHLGNVNLEIEIGEKKLDLT-VSPFNA 496
ESL+ ++ + EH+E YE R S K VNLEIE E++ DL +
Sbjct: 603 ESLKQKQKNLSEHWE-----YEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAELKY 657
Query: 495 TLIMHFQNKSEWTLDELHQVMKVPITILRRKIT 397
++ Q + E ++L + + ++LR ++T
Sbjct: 658 GTLLSLQKQLEEAENKLMEFQQSGKSMLREEVT 690
>01_05_0327 + 20984336-20985478
Length = 380
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 108 DCIQCLELGKQTSSTFDVFCPKANSPSLLTCLQYKTKKLAVHLPADHVLMPLHSQ 272
D ++CL +GK + D A + L+ K K+L LP DH+L PL +Q
Sbjct: 7 DAVKCLRIGKAAADAGD----SARAVKFLS----KAKRLDPSLPIDHLLDPLLNQ 53
>08_02_1203 +
25262875-25263492,25264761-25264813,25265308-25265373,
25265581-25265695,25265860-25265970
Length = 320
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/93 (22%), Positives = 40/93 (43%)
Frame = -3
Query: 546 IEIGEKKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRRKITYWQSMGLIAE 367
IEI + L P A + Q +E E +V ++ + + R+ T W++ ++ +
Sbjct: 111 IEIRRSRAGLGAEP--AVSVAPPQPSAEVAEGERRRVEEMAVELRARQSTQWRNRRVVWD 168
Query: 366 KSTDHFVLVEADNKASVPSHQVQEMICEDEETE 268
L + +N+ + P E E+EE E
Sbjct: 169 YRKAEAALAQLENREAAPPPPEGEEKAEEEEEE 201
>01_02_0031 + 10364487-10365407
Length = 306
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -3
Query: 306 QVQEMICEDEETESAMASAHDQREGELQVFWSYIVGMLTNLDCLPLDRI 160
Q+++M ++ E E+ + HD +G L + S V LT++DCL R+
Sbjct: 100 QLRKMDRDNHERETLIL-LHDALQGRLGTYESLSVEQLTSVDCLASARL 147
>01_01_0078 +
587975-588179,588506-588606,589087-589167,589240-590178,
590388-590542,590837-590902,590963-591023,591659-591853,
591939-592049,592116-592280
Length = 692
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 123 LELGKQTSSTFDVFCPKANSPSLLTCLQYKTKKLAVHLPADHVLM 257
L L KQT F K + SLL C KL +H + H+L+
Sbjct: 433 LPLPKQTPQKFFSSTSKTRNQSLLVCKHMLKHKLVIHSISVHILV 477
>11_01_0059 -
444991-446908,447595-448218,448431-448861,450974-452293
Length = 1430
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = -3
Query: 372 AEKSTDHFVLVEADNKASVPSHQVQEMICEDEETESAMASAHDQR 238
+E S DH V+V + V++++ E +++E ++ HD++
Sbjct: 365 SEGSNDHVVIVHEEMVPPAVQVVVEQVVVEGDKSEEECSAVHDEK 409
>03_05_0943 + 29034398-29034512,29035059-29035508,29035654-29035826
Length = 245
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 253 ST*SAGR*TASFLVLYCRHVNKLGLFAFGQNTSNVEDVC 137
+T +G AS L Y R GLFA G++ ++ ED C
Sbjct: 145 ATNGSGMAMASLLDKYRRECGAAGLFAIGRHHNSKEDYC 183
>12_01_0194 + 1441406-1441726,1442416-1442559,1443172-1443666
Length = 319
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 216 KKLAVHLPADHVLMPLHSQFLH 281
KKL V L DHVL+ HS+ +H
Sbjct: 89 KKLLVSLVKDHVLLDQHSKAIH 110
>01_05_0502 +
22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 573 PHLGNVNLEIEIGEKKLDLTVSPFNATLIMHFQNKSEW 460
P +GN+ I K + L S N T+ +H Q SEW
Sbjct: 528 PKIGNIGHMTRITNKLIQLGSS--NGTIQIHLQENSEW 563
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 130 SSRH*MQSYGAETIFRHKSKNTSTGTXKEACTNCL 26
SSRH + Y +T +HKSK + G+ K +CL
Sbjct: 836 SSRHSREKYHGDTTDQHKSKKSEEGS-KSRKDDCL 869
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,379,045
Number of Sequences: 37544
Number of extensions: 367720
Number of successful extensions: 947
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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