Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_L21
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0367 + 22399785-22399899,22400911-22401102,22401990-224021...    29   4.5  
10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079,514...    28   7.9  

>02_04_0367 +
           22399785-22399899,22400911-22401102,22401990-22402117,
           22402229-22402384,22402948-22403206,22403762-22403836,
           22404288-22404610,22405041-22405274,22405355-22405542,
           22405734-22405869,22405963-22406071,22406988-22407090,
           22407188-22407374,22407467-22407565,22407666-22407724,
           22408581-22408686,22408798-22408962
          Length = 877

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 47  PLISCYSLVIVL**VWDNHYFYLLHYE*TSSWL 145
           P + CY LVI+L  V   H+F+L+    T SW+
Sbjct: 801 PRLGCYFLVILLSDVMTIHFFFLVRN--TGSWM 831


>10_02_0089 -
           5138048-5138561,5138864-5139105,5139712-5140079,
           5140862-5140943
          Length = 401

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
 Frame = +3

Query: 192 MYCSLLFMFKPVCVSA---SQPTNARWWYLPVRT--DTTPY-HQLLHK 317
           M+ + +FM + +  SA   S P  A W+Y PV T  D TP+ H L  K
Sbjct: 61  MFATEIFMHRFLLSSAIRTSNPDEADWFYTPVYTTCDLTPWGHPLTTK 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,515,863
Number of Sequences: 37544
Number of extensions: 317953
Number of successful extensions: 474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)