BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_L13
(605 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009982-1|AAQ22451.1| 1272|Drosophila melanogaster RE53634p pro... 28 8.6
AE014296-3314|AAF49041.3| 1272|Drosophila melanogaster CG32227-P... 28 8.6
>BT009982-1|AAQ22451.1| 1272|Drosophila melanogaster RE53634p protein.
Length = 1272
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 88 EEYSERTEEDADPQPRHQEPRGQKRYLFE 174
EE +ER E+D P+P R +++ L+E
Sbjct: 1049 EEVAEREEDDKTPEPEPDPERDERQPLYE 1077
>AE014296-3314|AAF49041.3| 1272|Drosophila melanogaster CG32227-PA
protein.
Length = 1272
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 88 EEYSERTEEDADPQPRHQEPRGQKRYLFE 174
EE +ER E+D P+P R +++ L+E
Sbjct: 1049 EEVAEREEDDKTPEPEPDPERDERQPLYE 1077
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,720,433
Number of Sequences: 53049
Number of extensions: 469233
Number of successful extensions: 1570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -