BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_L11
(619 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029127-1|ABJ17060.1| 378|Drosophila melanogaster IP16036p pro... 37 0.019
AY058415-1|AAL13644.1| 402|Drosophila melanogaster GH19182p pro... 37 0.019
AE014296-1496|AAO41263.1| 215|Drosophila melanogaster CG6416-PI... 37 0.019
AE014296-1495|AAO41265.2| 239|Drosophila melanogaster CG6416-PJ... 37 0.019
AE014296-1494|AAF50384.1| 239|Drosophila melanogaster CG6416-PA... 37 0.019
AE014296-1492|AAN11991.2| 402|Drosophila melanogaster CG6416-PF... 37 0.019
AE014296-1491|AAN11990.2| 430|Drosophila melanogaster CG6416-PE... 37 0.019
>BT029127-1|ABJ17060.1| 378|Drosophila melanogaster IP16036p
protein.
Length = 378
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 351 VVNTHDENIRQSGSFNRLMYSVIGATEY 378
>AY058415-1|AAL13644.1| 402|Drosophila melanogaster GH19182p
protein.
Length = 402
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 375 VVNTHDENIRQSGSFNRLMYSVIGATEY 402
>AE014296-1496|AAO41263.1| 215|Drosophila melanogaster CG6416-PI,
isoform I protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 188 VVNTHDENIRQSGSFNRLMYSVIGATEY 215
>AE014296-1495|AAO41265.2| 239|Drosophila melanogaster CG6416-PJ,
isoform J protein.
Length = 239
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 212 VVNTHDENIRQSGSFNRLMYSVIGATEY 239
>AE014296-1494|AAF50384.1| 239|Drosophila melanogaster CG6416-PA,
isoform A protein.
Length = 239
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 212 VVNTHDENIRQSGSFNRLMYSVIGATEY 239
>AE014296-1492|AAN11991.2| 402|Drosophila melanogaster CG6416-PF,
isoform F protein.
Length = 402
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 375 VVNTHDENIRQSGSFNRLMYSVIGATEY 402
>AE014296-1491|AAN11990.2| 430|Drosophila melanogaster CG6416-PE,
isoform E protein.
Length = 430
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 604 VNSLHEEHIQQSNSFKRLMFNVLGDTEF 521
V + H+E+I+QS SF RLM++V+G TE+
Sbjct: 403 VVNTHDENIRQSGSFNRLMYSVIGATEY 430
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,003,952
Number of Sequences: 53049
Number of extensions: 395722
Number of successful extensions: 592
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -