Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_L09
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    28   0.062
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 0.062
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 114 HRLFFHIFVHSVYNEHQTKHTKVAWFCTXSSC 19
           H+L   I  + ++  ++  H  + W CT ++C
Sbjct: 234 HQLLLTILTYLIWTIYEMYHLAILWSCTSTNC 265


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 409 KWKSNDRVKN*RNVRK 362
           KWK ++++ N +NVR+
Sbjct: 287 KWKKDNKLPNTKNVRR 302


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 409 KWKSNDRVKN*RNVRK 362
           KWK ++++ N +NVR+
Sbjct: 287 KWKKDNKLPNTKNVRR 302


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = -3

Query: 84  SVYNEHQTKHTKVAWFCTXSSCFKTRWC 1
           S+ N H   H+ V  +      + T++C
Sbjct: 272 SMLNSHMKSHSNVYRYSCRDCSYATKYC 299


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = -3

Query: 84  SVYNEHQTKHTKVAWFCTXSSCFKTRWC 1
           S+ N H   H+ V  +      + T++C
Sbjct: 30  SMLNSHMKSHSNVYRYSCRDCSYATKYC 57


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 96  IFVHSVYNEHQTKHTKVAWF 37
           IF+ +V+     KH+K+A F
Sbjct: 87  IFIVTVWMTGAVKHSKIAHF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,888
Number of Sequences: 336
Number of extensions: 2030
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)