Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_L04
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 184 5e-47
04_01_0103 + 1082077-1082167,1083037-1085477 182 3e-46
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 156 2e-38
01_06_0662 + 30987187-30987277,30987825-30990214 152 2e-37
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 127 6e-30
03_05_0511 + 25056018-25059107 91 7e-19
02_04_0148 - 20198407-20201424 87 1e-17
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 52 4e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 5e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 38 0.009
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 37 0.016
01_04_0109 + 16112581-16112934 32 0.33
09_06_0142 - 21107878-21109104 28 5.4
01_06_0456 + 29521282-29522064 27 9.5
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 184 bits (448), Expect = 5e-47
Identities = 84/133 (63%), Positives = 104/133 (78%)
Frame = -2
Query: 637 RRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 458
RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +K
Sbjct: 711 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIK 770
Query: 457 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLK 278
AYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ DP E S+ +VQ+ RKRKGLK
Sbjct: 771 AYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLK 830
Query: 277 EGLPDLTQYLDKL 239
E + L+ + DKL
Sbjct: 831 EQMTPLSDFEDKL 843
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 182 bits (442), Expect = 3e-46
Identities = 83/133 (62%), Positives = 103/133 (77%)
Frame = -2
Query: 637 RRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 458
RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +K
Sbjct: 711 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIK 770
Query: 457 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLK 278
AYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ DP E S+ +V + RKRKGLK
Sbjct: 771 AYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLK 830
Query: 277 EGLPDLTQYLDKL 239
E + L+ + DKL
Sbjct: 831 EQMTPLSDFEDKL 843
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 156 bits (378), Expect = 2e-38
Identities = 71/133 (53%), Positives = 92/133 (69%)
Frame = -2
Query: 637 RRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 458
RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G + EES+ GTP+ ++
Sbjct: 721 RRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLR 780
Query: 457 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLK 278
YLPV +SF FT LR+ T GQAFPQC+F HWQ + DP + S+ V+ + RKRKGLK
Sbjct: 781 FYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
Query: 277 EGLPDLTQYLDKL 239
+ + L+ Y DKL
Sbjct: 841 DIITPLSDYEDKL 853
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 152 bits (369), Expect = 2e-37
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = -2
Query: 637 RRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 458
RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVFEE Q GTP++ +K
Sbjct: 709 RRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIK 768
Query: 457 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 323
AYLPV ESFGFT+ LR+ T GQAFP VFDHW++L DP EP ++
Sbjct: 769 AYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 127 bits (307), Expect = 6e-30
Identities = 69/144 (47%), Positives = 89/144 (61%), Gaps = 12/144 (8%)
Frame = -2
Query: 637 RRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 458
RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRRGHV + GTP+++VK
Sbjct: 837 RRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVK 896
Query: 457 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PCEP---QSKPYN 314
A+LPV ESFGF DLR +T GQAF VFDHW ++PGD P EP Q
Sbjct: 897 AFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLARE 956
Query: 313 VVQETRKRKGLKEGLPDLTQYLDK 242
+ +TR+RKG+ E + + ++ D+
Sbjct: 957 FMVKTRRRKGMSEDV-SINKFFDE 979
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = -2
Query: 604 QPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 425
+PRL+E +Y CE+ P +G Y VL+R+R V +E GT +F V AYLPV ES GF
Sbjct: 885 KPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHAYLPVAESVGF 944
Query: 424 TADLRSNTGGQAFPQCVFDHWQVLPGDP 341
+ +LRS T G A V HW+ +P DP
Sbjct: 945 SNELRSVTAGAASALLVLSHWEAIPEDP 972
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 86.6 bits (205), Expect = 1e-17
Identities = 41/99 (41%), Positives = 54/99 (54%)
Frame = -2
Query: 637 RRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 458
R A L ++PRL+EP+Y CE+ P +G +Y VL R V +E GT +F V
Sbjct: 850 REACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTVH 909
Query: 457 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 341
AYL V ES F+ LR+ T G A F HW+ +P DP
Sbjct: 910 AYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = -2
Query: 607 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 428
A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E F
Sbjct: 647 AGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAEMFQ 705
Query: 427 FTADLRSNTGGQAFPQCVFDHWQVLP 350
+ + LR T G+A + V+P
Sbjct: 706 YVSTLRGMTKGRASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = -2
Query: 619 CXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 440
C A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
Query: 439 ESFGFTADLRSNTGGQ 392
FG++ LRS T G+
Sbjct: 723 NMFGYSTALRSMTQGK 738
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -2
Query: 610 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 431
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 430 GFTADLRSNTGGQAFPQCVFDHWQVLPGD 344
G + + + G A +FD + GD
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYGPWAGD 585
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 438 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 283
S S +P +P P D PS+ +T G S+ +N SP+ +Y K G D
Sbjct: 19 STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70
>01_04_0109 + 16112581-16112934
Length = 117
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 441 MSRSVLLP--ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 286
M+ VL P + +P+PA R R+ +T R++ +++ R PTT +R +G+
Sbjct: 1 MATEVLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54
>09_06_0142 - 21107878-21109104
Length = 408
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 317 VGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 436
V L L++ E LP++ A REG++ AGV +GS R
Sbjct: 171 VDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
>01_06_0456 + 29521282-29522064
Length = 260
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 313 RCRACSEVRTGLQGGPANGRIRTAGRPVRRCWNANR 420
R C +G +GG R R AG RRC A+R
Sbjct: 11 RAWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADR 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,911,666
Number of Sequences: 37544
Number of extensions: 359702
Number of successful extensions: 924
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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