Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_L03
(453 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 1.0
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 23 1.3
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 23 1.3
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 22 3.1
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 5.4
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 5.4
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 5.4
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 5.4
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 5.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 20 9.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 20 9.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 20 9.4
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.4 bits (48), Expect = 1.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 338 SHWETQGDTEFRSRGTTTSS 397
+HW+T+ T +R TTT S
Sbjct: 1181 NHWQTKTTTSTTTRPTTTVS 1200
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 23.0 bits (47), Expect = 1.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 92 YDTRIVLKVYKYSITPSERFPLPDD 166
Y +VL YS+ E F PDD
Sbjct: 4 YACLLVLSALIYSVLGQENFKCPDD 28
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 23.0 bits (47), Expect = 1.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 92 YDTRIVLKVYKYSITPSERFPLPDD 166
Y +VL YS+ E F PDD
Sbjct: 4 YACLLVLSALIYSVLGQENFKCPDD 28
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.8 bits (44), Expect = 3.1
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 395 RTWWFRGSEIPYLPGSPSGSSNQL 324
R WW R + Y+ + SG L
Sbjct: 73 RPWWERYQPVSYILNTRSGDETAL 96
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 395 RTWWFRGSEIPYLPGSPSGSSNQL 324
R WW R + Y+ + SG L
Sbjct: 72 RPWWERYQPVSYILNTRSGDEAAL 95
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 395 RTWWFRGSEIPYLPGSPSGSSNQL 324
R WW R + Y+ + SG L
Sbjct: 73 RPWWERYQPVSYILNTRSGDEAAL 96
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.0 bits (42), Expect = 5.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -3
Query: 283 VQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 161
+QG + G+ ++ VKK KPE+ + A ++
Sbjct: 144 IQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIVAKLV 184
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.0 bits (42), Expect = 5.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 5 EAIRGHRSAHSLATGPXDGRALHFALVIDYDTRIVLKVY 121
+++R H SL +GRA LV++Y +R L+ Y
Sbjct: 505 KSVRQHPYIVSLIGCVTEGRAEGPLLVVEYCSRGDLQTY 543
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 288 ITYRFFAPVLSAQLITAPTGRP 353
I RF + + A L+T+P RP
Sbjct: 225 IVERFTSDRVHAALVTSPRARP 246
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 266 SPEQTAGGRFRGHDCGHS 213
SP+Q G R DCG +
Sbjct: 548 SPDQFCNGDNRPPDCGQN 565
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 215 CGHNHVPGTGRRQSV 259
C H PGT RQS+
Sbjct: 616 CYHAVAPGTDIRQSI 630
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 215 CGHNHVPGTGRRQSV 259
C H PGT RQS+
Sbjct: 508 CYHAVAPGTDIRQSI 522
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,660
Number of Sequences: 336
Number of extensions: 2567
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -