Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_L02
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0187 - 6248226-6249226,6249296-6250148 59 9e-18
05_01_0121 - 833885-833949,834180-834430,834545-834604,834893-83... 69 3e-16
07_03_1000 - 23220878-23221821,23222164-23223001 80 2e-15
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 68 9e-12
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 57 1e-08
05_04_0177 + 18770409-18770897 35 0.080
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 31 1.3
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 31 1.3
03_02_0383 + 7966929-7968951,7969085-7969104 30 1.7
01_06_1525 + 37988037-37988237,37988315-37988410,37988508-379886... 30 1.7
02_05_0132 - 26109152-26109852,26109962-26110358 30 2.3
02_01_0404 - 2945611-2948802 30 2.3
09_03_0101 + 12374771-12374926,12375505-12375731,12375816-123759... 29 3.0
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 29 3.0
01_03_0304 - 14838977-14838988,14839291-14840302,14840414-148406... 29 3.0
06_01_0047 - 429838-429960,430413-430508,430589-430596,431088-43... 29 4.0
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 29 5.2
01_06_0925 - 33067106-33067280,33069193-33069517,33070757-330707... 29 5.2
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 28 6.9
07_03_1425 + 26489446-26491425 28 6.9
02_05_0078 - 25656695-25656888,25656941-25657127,25657765-256580... 28 6.9
02_04_0277 - 21494616-21494747,21494830-21494916,21495025-214951... 28 6.9
01_07_0378 - 43167805-43169152,43169258-43169326,43169473-431695... 28 6.9
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 28 6.9
09_06_0314 + 22242843-22243649 28 9.2
09_06_0055 - 20550889-20551531,20551612-20551889,20552035-205522... 28 9.2
02_01_0405 - 2952434-2955583 28 9.2
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 58.8 bits (136), Expect(2) = 9e-18
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = -3
Query: 328 IVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKHPPKDPVTIHVRQRIEEHTC 149
++GGE +W E +D+T + +R WPR +A AE LWSG + K + R+ +
Sbjct: 532 VLGGEVALWSEQSDETVLDARLWPRAAAAAETLWSGNKGSNGKKR--YANATDRLNDWRH 589
Query: 148 RMLRRGIAAEP 116
RM+ RGI AEP
Sbjct: 590 RMVERGIRAEP 600
Score = 49.2 bits (112), Expect(2) = 9e-18
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = -3
Query: 751 IREVQNXFPDRYYHVGGDEVDLXXWQSNPEXKEYMKQHNLTANGVHAMFM---KEVIGRV 581
+R++ FPD Y H G DEV+ W+ +P + ++ + T + + +F+ + + +
Sbjct: 349 LRDMVALFPDPYLHGGADEVNTACWEDDPVVRRFLAEGG-THDHLLELFINATRPFVAQE 407
Query: 580 KKTTVPIVWQEV-YDEKVPIS------KDTLIQVWKYKWIDEMIKILNSGHKVVFSSSWY 422
TV + W++V KV + + T++Q W + +++ +G++ + SS+ Y
Sbjct: 408 LNRTV-VYWEDVLLGPKVTVGPTILPRETTILQTWN-DGPENTKRVVAAGYRAIVSSASY 465
Query: 421 LDYLNFNWNSFYGDDPRLMVYQKKKNAR-LENIVGGEACMW 302
YL+ + G+D R +K++ L N GG W
Sbjct: 466 Y-YLDCGHGGWVGNDSRYDKQEKEREGTPLFNDPGGTGGSW 505
>05_01_0121 -
833885-833949,834180-834430,834545-834604,834893-834926,
835746-835805,836409-836509,836939-837039,837209-837289,
837580-837650,837738-837849,838138-838173,838865-838951,
839055-839396
Length = 466
Score = 68.9 bits (161), Expect(2) = 3e-16
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Frame = -3
Query: 556 WQEVYDE-KVPISKDTLIQVWKYKWIDEMIKILNSGHKVVFSSS--WYLDYLNFNWNSFY 386
W+E ++ K ++ T++ W + K++ G + + S+ WYLD+L+ W FY
Sbjct: 342 WEETFNSFKENLNPLTVVHNWLGPGVCP--KVVEKGFRCIMSNQGVWYLDHLDVPWQDFY 399
Query: 385 GDDPRLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKH 206
+P + A+ + ++GGE CMWGE AD ++V WPR +A A + + +
Sbjct: 400 TSEPLAGI---NNTAQQKLVLGGEVCMWGETADTSDVQQTIWPRAAAAAAPVTNSY-ARR 455
Query: 205 PPKDP 191
PP P
Sbjct: 456 PPIGP 460
Score = 33.9 bits (74), Expect(2) = 3e-16
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 751 IREVQNXFPDRYYHVGGDEVDLXXWQSNPEXKEYMKQHN 635
+ +++ FP +H+GGDEV W + P K++ + N
Sbjct: 309 LSDMRKIFPFGLFHLGGDEVYTGCWNATPHVKQWEETFN 347
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 79.8 bits (188), Expect = 2e-15
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Frame = -3
Query: 751 IREVQNXFPDRYYHVGGDEVDLXXWQSNPEXKEYMKQHNLTANGVHAMFMKEVIGR---- 584
I +V + FPD +YH G DEV W ++P + Y L G + +++ +G
Sbjct: 335 INDVTSLFPDGFYHAGADEVTPGCWNADPSIQRY-----LARGGTLSRLLEKFVGAAHPL 389
Query: 583 -VKKTTVPIVWQEVY-DEKVPIS------KDTLIQVWKYKWIDEMIKILNSGHKVVFSSS 428
V + + W++V D+ V ++ + T++Q W + + I+ +G++ + SS+
Sbjct: 390 IVSRNRTAVYWEDVLLDQAVNVTASAIPPETTILQTWNNGGNNTRL-IVRAGYRAIVSSA 448
Query: 427 --WYLD--YLNFNWNSFYGDDPRL-----------------MVYQ-------KKKNARLE 332
+YLD + +F N DDPR VY + ARL
Sbjct: 449 SFYYLDCGHGDFAGNDSAYDDPRSDYGTSGGSWCGPYKTWQRVYDYDVAGGLTAEEARL- 507
Query: 331 NIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKHPPKDPVTIHVRQRIEEHT 152
+VGGE MW E D + R WPR SA+AE LWSG + R+ +
Sbjct: 508 -VVGGEVAMWTEQVDAAVLDGRVWPRASAMAEALWSG--NRDATGRKRYAEATDRLTDWR 564
Query: 151 CRMLRRGIAAEP------PNGPGFC 95
RM+ RG+ AEP N PG C
Sbjct: 565 HRMVGRGVRAEPIQPLWCRNRPGMC 589
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 67.7 bits (158), Expect = 9e-12
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Frame = -3
Query: 751 IREVQNXFPDRYYHVGGDEVDLXXWQSNPEXKEYMKQHNLTANGVHAMFMKEVIGRVKKT 572
+ + F ++ H+GGDEV+ W S P K ++ QH + + + F+ K
Sbjct: 301 LSDFSKVFKFKFVHLGGDEVNTSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKIAKSH 360
Query: 571 TVPIV-WQEVYDE-KVPISKDTLIQVWKYKWIDEMIKILNSGHKVVFSS--SWYLDYLNF 404
++ W+E ++ + + T++ W + E K++ +G + + S+ WYLD+L
Sbjct: 361 GYEVINWEETFNNFGDKLDRRTVVHNWLGGGVAE--KVVAAGLRCIVSNQDKWYLDHLEV 418
Query: 403 NWNSFYGDDPRLMVYQKKKNARLENIVGGE 314
W+ FY ++P + K A+ + ++GGE
Sbjct: 419 TWDGFYMNEPLRNI---KNPAQQKLVLGGE 445
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/150 (21%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Frame = -3
Query: 751 IREVQNXFPDRYYHVGGDEVDLXXWQSNPEXKEYMKQHNLTANGVHAMF-MKEVIGRVKK 575
+ + F ++ H+GGDEV+ W + P K+++ + + + + F ++ +
Sbjct: 294 LSDFSKVFKFKFVHLGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISH 353
Query: 574 TTVPIVWQEVYDE-KVPISKDTLIQVWKYKWIDEMIKILNSGHKVVFSS--SWYLDYLNF 404
I W+E ++ + + T++ W + D K++ +G + + S+ WYLD+L+
Sbjct: 354 GYDVINWEETFNNFGDKLDRRTVVHNWLGE--DVAPKVVAAGLRCIVSNQDKWYLDHLDA 411
Query: 403 NWNSFYGDDPRLMVYQKKKNARLENIVGGE 314
W FY ++P + ++ + ++GGE
Sbjct: 412 TWEGFYTNEPLKGIDDPEQQSL---VIGGE 438
>05_04_0177 + 18770409-18770897
Length = 162
Score = 34.7 bits (76), Expect = 0.080
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = -3
Query: 730 FPDRYYHVGGDEVDLXXWQSNPEXKEYMKQHNLTANGVHAMFMKEVIGRVKKTTVPIVWQ 551
FPD Y H G DEV+ W+++P + + L G H ++ I TT P V Q
Sbjct: 5 FPDPYLHGGTDEVNTACWENDPVVRRF-----LAEGGTHNHLLEVFI----NTTRPFVAQ 55
Query: 550 EV 545
E+
Sbjct: 56 EL 57
>11_06_0109 +
20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = -3
Query: 508 IQVWKYKWIDEMIKILNSGHKVVFSSSW----YLDYLNFNWNSFYGDDPRLMVY-QKKKN 344
+Q+WK K+ D+ + ++ +G + S S +L +L+ +WN+ G D + + +N
Sbjct: 78 LQLWKPKFDDDGMSLVGNGMVGLISPSLLSLEHLQHLDLSWNNLSGSDGHIPGFIGSFRN 137
Query: 343 ARLENIVG 320
R N+ G
Sbjct: 138 LRYLNLSG 145
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 511 LIQVWKYKWIDEMIKILNSGHKVVFSSSWYLDYLNFNWNSFYGDDPRLMVYQK---KKNA 341
L+ W K + ++ K + G + + YLD+LNF D PR+ V++ KK +
Sbjct: 346 LVFEWLMKHLSKLEKSKSFGGCLYYLVVNYLDFLNFGMRKVLQDTPRIKVWKGTMIKKFS 405
Query: 340 RLENIVGG 317
+ + I G
Sbjct: 406 KFDKISKG 413
>03_02_0383 + 7966929-7968951,7969085-7969104
Length = 680
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = -3
Query: 370 LMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKHPPKDP 191
++VY+ N L++ + G+ C E+ + WPR AVA + + L Y H P
Sbjct: 196 MLVYELMPNGSLQDALLGKRCP--ELVSE-------WPRRLAVARDVAAALHYLHSVAQP 246
Query: 190 VTIH 179
IH
Sbjct: 247 PVIH 250
>01_06_1525 +
37988037-37988237,37988315-37988410,37988508-37988620,
37988739-37988805,37988891-37988983,37989095-37989238,
37989681-37989769,37989912-37990017,37990224-37990311,
37990395-37990513,37990786-37990950,37991222-37991406,
37991568-37991668,37991960-37992069,37992287-37992394,
37992596-37992706,37992791-37993002,37993087-37993423,
37993593-37993619,37993767-37993877
Length = 860
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 280 NVISRTWPRTSAVAERLWSGLDYK 209
N I R WPR S V++R S DY+
Sbjct: 661 NAIGRYWPRISPVSDRCTSSCDYR 684
>02_05_0132 - 26109152-26109852,26109962-26110358
Length = 365
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 262 WPRTSAVAERLWSGLDYKHPPKDPVTIH 179
W R AVA ++ L+Y H +DP IH
Sbjct: 165 WARRMAVAFQVAMALEYLHESRDPAVIH 192
>02_01_0404 - 2945611-2948802
Length = 1063
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = -3
Query: 400 WNSFYGDDPRLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSG 221
W + RL++Y +N L++ W DD WP+ +A+ G
Sbjct: 838 WGYCIQGNSRLLIYSYMENGSLDD--------WLHNRDDDASTFLDWPKRLKIAQGAGRG 889
Query: 220 LDYKHPPKDPVTIH 179
L Y H P IH
Sbjct: 890 LSYIHDACKPHIIH 903
>09_03_0101 +
12374771-12374926,12375505-12375731,12375816-12375971,
12376066-12376251,12376407-12376591,12376984-12376991
Length = 305
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 459 FRIFIISSIHLYFQTCMRVSLEIGTFSSYTSCQTIGTVVF 578
FR + S+ L + LEIG S Y+SC+ + F
Sbjct: 179 FRFARVGSVVLALHDASDIFLEIGKMSKYSSCEGLAVAAF 218
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = -3
Query: 400 WNSFYGDDPRLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSG 221
W + RL++Y +N L++ W DD WPR +A+ G
Sbjct: 770 WGYCIQGNSRLLIYSYMENGSLDD--------WLHNKDDDTSTILDWPRRLKIAKGASHG 821
Query: 220 LDYKHPPKDPVTIH 179
L Y H P +H
Sbjct: 822 LSYIHNICKPRIVH 835
>01_03_0304 -
14838977-14838988,14839291-14840302,14840414-14840609,
14840795-14841149
Length = 524
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 553 QEVYDEKVPISKDTLIQVWKYKWIDE 476
+E Y E V IS+D + Q W WIDE
Sbjct: 57 EEAYSELVEISRDNISQ-WVESWIDE 81
>06_01_0047 -
429838-429960,430413-430508,430589-430596,431088-431141,
431226-431274,431368-431466,431560-431639,431926-431989,
432082-432255,432342-432965,433046-433189,433262-433372,
433442-433498,433664-433798
Length = 605
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 511 LIQVWKYKWIDEMIKILNSGHKVVFSSSWYLDYLNFNWNSFYGDDPRLMVYQK 353
L+ W I ++ K+ G ++ + YLD+LNF D PR+ V+++
Sbjct: 331 LVFDWLMDHISKLEKLKTFGGCLLHLTVNYLDFLNFGSQKVLLDTPRIKVWKR 383
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 703 GDEVDLXXWQSNPEXKEYMKQHNLTANGVHAMFMKEVIGRVKKTTVPIVWQEVYDEKVPI 524
G+EV L W N KE ++ + + + ++ G VK T + + W D+ VP+
Sbjct: 573 GEEVTLMDW-GNAIIKEIKMENGVITELIGELHLE---GSVKTTKLKVTWLPDIDDLVPL 628
Query: 523 S 521
S
Sbjct: 629 S 629
>01_06_0925 -
33067106-33067280,33069193-33069517,33070757-33070795,
33071188-33071395
Length = 248
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 640 HNLTANGVHAMFMKEVIGRVKKTTVPIVWQEVYDEKVPISKDTLIQVW 497
H LT + +E G+ + T VW V EKVP+SK L++ +
Sbjct: 83 HKLTPSAFEKHSGRETAGKWRNT----VWVMVQGEKVPLSKTALLKYY 126
>10_02_0129 +
5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 280 SYRQPSRPTYKLHRQRCSPDERSSSSGR 363
S RQ K HRQR +PDER + R
Sbjct: 85 SERQKESARRKAHRQRLTPDERQELNAR 112
>07_03_1425 + 26489446-26491425
Length = 659
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 105 GPLGGSAAIPRRSIRQVCSSIRCRT*IVTGSFGGCL 212
GP GSAA R I VC S R + T +FGG +
Sbjct: 547 GP-AGSAAADRERINHVCFSPDSRWLLFTANFGGVM 581
>02_05_0078 -
25656695-25656888,25656941-25657127,25657765-25658067,
25658152-25658296,25658376-25658613,25658694-25658904,
25659060-25659175,25659420-25659468
Length = 480
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -3
Query: 373 RLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKHPPKD 194
R+++Y+ +N L+N + G A V +W S + + GL Y H +
Sbjct: 108 RILIYEYVENNSLDNALQGSA---------AGVTDLSWSTRSDICMGVAKGLSYLHEEHE 158
Query: 193 PVTIH 179
P +H
Sbjct: 159 PSIVH 163
>02_04_0277 -
21494616-21494747,21494830-21494916,21495025-21495157,
21495267-21495540,21495829-21495955,21496048-21496311
Length = 338
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -3
Query: 382 DDPRLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKHP 203
D R++ YQ L NI+ G+ + G A+ V++ W + +A GL+Y H
Sbjct: 110 DGNRMLAYQFATMGSLHNILHGKKGVQG--AEPGPVLN--WAQRVKIAYGAARGLEYLHE 165
Query: 202 PKDPVTIH 179
P +H
Sbjct: 166 KVQPSIVH 173
>01_07_0378 -
43167805-43169152,43169258-43169326,43169473-43169544,
43169677-43169745,43169979-43171161,43171239-43171365
Length = 955
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 301 GEMADDTNVISRTWPRTSAVAERLWSGLDYKHPPKDPVTIH 179
G + + ++S +W R VAE G++Y H P IH
Sbjct: 700 GSLKEQLQMMSISWLRRLQVAEDAAKGIEYLHCGCTPAIIH 740
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 421 LDYLNFNWNSFYGDDPRLMVYQKKKNARLENIVGGEACMWGEMADDTNVIS 269
L L+FNW F+ ++YQ +N + ++GGE E DD N+ S
Sbjct: 255 LTELSFNWIGFWSAMASNLLYQ-SRNVLSKKLLGGEE----EALDDINLFS 300
>09_06_0314 + 22242843-22243649
Length = 268
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 459 IRVTKSFFHRHGIWTI*TSIGTRFMVTTLGLWSTRRRRTL 340
+R+ SF H +W+I T T F++ G +S RRR L
Sbjct: 199 MRIAFSFCREH-MWSIKTCADTPFLLLGCGAFSLRRRLKL 237
>09_06_0055 - 20550889-20551531,20551612-20551889,20552035-20552203,
20552397-20552534,20553945-20553997,20554521-20554574,
20556062-20556295,20556399-20556986,20557065-20557419,
20557494-20557694,20557925-20557998,20558114-20558254,
20558611-20558670,20558750-20558806,20559281-20559318,
20559419-20559578
Length = 1080
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -3
Query: 391 FY-GDDPRLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLD 215
FY G D RL+VY N L + G + +V WPR A+A GL
Sbjct: 812 FYAGGDERLIVYDYMPNHSLLTHLHPHR---GTPSSHHHV-PLEWPRRVAIAVGAAEGLS 867
Query: 214 YKHPPKDPVTIH 179
Y H P IH
Sbjct: 868 YLHHEASPHIIH 879
>02_01_0405 - 2952434-2955583
Length = 1049
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -3
Query: 373 RLMVYQKKKNARLENIVGGEACMWGEMADDTNVISRTWPRTSAVAERLWSGLDYKHPPKD 194
RL++Y +N L++ W DD WPR +A+ GL Y H
Sbjct: 838 RLLIYSYMENGSLDD--------WLHNKDDGTSTILDWPRRLKIAKGASHGLSYIHNICK 889
Query: 193 PVTIH 179
P +H
Sbjct: 890 PRIVH 894
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,073,601
Number of Sequences: 37544
Number of extensions: 430775
Number of successful extensions: 1311
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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