Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K16
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.4  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   4.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.4  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   9.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   9.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 288 NLRIEYANVIKKISYKAQFSST 223
           NL+IE   V K I+Y  QF +T
Sbjct: 448 NLKIESFTVDKLITYFEQFDTT 469


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 288 NLRIEYANVIKKISYKAQFSST 223
           NL+IE   V K I+Y  QF +T
Sbjct: 448 NLKIESFTVDKLITYFEQFDTT 469


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 357 HPNSNDDNNMLNYKYGRIHSN 419
           H N+N +NN  N  Y   ++N
Sbjct: 324 HNNNNYNNNNYNNNYNNYNNN 344


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 339 SSYLYYHPNSNDDNNMLNYKY 401
           ++Y Y + N+N +NN  N  Y
Sbjct: 327 NNYKYNYNNNNYNNNNYNNNY 347


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 339 SSYLYYHPNSNDDNNMLNYK 398
           ++Y Y + N+N +NN  N K
Sbjct: 92  NNYKYNYNNNNYNNNNYNKK 111


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 339 SSYLYYHPNSNDDNNMLNYK 398
           ++Y Y + N+N +NN  N K
Sbjct: 92  NNYKYNYNNNNYNNNNYNKK 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,608
Number of Sequences: 438
Number of extensions: 2227
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)