Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K15
         (543 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     25   0.66 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   6.1  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.1  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    21   8.1  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 333 GKLLFVNFHYKLLHLDLI*GQKRFSHYD 416
           G +  + FH K   L L  G+K FSHY+
Sbjct: 255 GSISKLQFHNKDDDLILTLGKKEFSHYE 282


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 408 HYDGDISSNGGDVTFFLDRNTDYNRPTSR 494
           H DG+   N G+ +   DR+ +Y +   R
Sbjct: 239 HEDGNSYRNDGERSCSRDRSREYKKKDRR 267


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 269 WKIIQECAKHISDRREQ 219
           W IIQ  A H  + REQ
Sbjct: 237 WFIIQAVAAHEKNMREQ 253


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -3

Query: 148 DKCIFSESLVILYSES*CSL*IP--SLVLNYY 59
           DKC F+E L  L   S  S  +P   +V  YY
Sbjct: 196 DKCPFTEHLGYLIFSSTISFYLPLFVMVFTYY 227


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 269 WKIIQECAKHISDRREQ 219
           W IIQ  A H  + REQ
Sbjct: 113 WFIIQAVAAHEKNMREQ 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,868
Number of Sequences: 438
Number of extensions: 2686
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)