Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_K13
(439 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 91 4e-19
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 91 4e-19
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 90 7e-19
Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical pr... 59 1e-09
AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc fi... 59 1e-09
Z81470-3|CAB03880.1| 401|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 30 0.85
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 30 0.85
Z81491-3|CAB04018.1| 194|Caenorhabditis elegans Hypothetical pr... 29 1.1
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 27 4.5
Z81103-4|CAB03210.1| 686|Caenorhabditis elegans Hypothetical pr... 27 7.9
AY652943-1|AAT73710.1| 686|Caenorhabditis elegans guanylate cyc... 27 7.9
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 90.6 bits (215), Expect = 4e-19
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -1
Query: 262 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 83
M+ I+TF+DFL QYN ++E CFN C+++F SRT+ E+ C NC++K+L+M QRVS
Sbjct: 1 MTSEQNIQTFRDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVS 60
Query: 82 QRFHEFQML-ANENMLALAQKAG 17
QRF E Q+L A N A+ + G
Sbjct: 61 QRFQEHQLLNAQANGAAIKVENG 83
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 90.6 bits (215), Expect = 4e-19
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -1
Query: 262 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 83
M+ I+TF+DFL QYN ++E CFN C+++F SRT+ E+ C NC++K+L+M QRVS
Sbjct: 1 MTSEQNIQTFRDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVS 60
Query: 82 QRFHEFQML-ANENMLALAQKAG 17
QRF E Q+L A N A+ + G
Sbjct: 61 QRFQEHQLLNAQANGAAIKVENG 83
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 89.8 bits (213), Expect = 7e-19
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -1
Query: 262 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 83
M+ I+TF+DFL QYN ++E CFN C+++F SRT+ E+ C NC++K+L+M QRVS
Sbjct: 1 MTSEQNIQTFRDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVS 60
Query: 82 QRFHEFQML 56
QRF E Q+L
Sbjct: 61 QRFQEHQLL 69
>Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical
protein B0564.1b protein.
Length = 111
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -1
Query: 262 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 83
M+ + I+ ++FL YN LSE CFN C D+T+ TL E C C++K + +N+R
Sbjct: 1 MNTIQNIQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQMLVNRRFM 60
Query: 82 QRFHE 68
F E
Sbjct: 61 LVFAE 65
>AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 111
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = -1
Query: 262 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 83
M+ + I+ ++FL YN LSE CFN C D+T+ TL E C C++K + +N+R
Sbjct: 1 MNTIQNIQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQMLVNRRFM 60
Query: 82 QRFHE 68
F E
Sbjct: 61 LVFAE 65
>Z81470-3|CAB03880.1| 401|Caenorhabditis elegans Hypothetical
protein C14A6.3 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.21
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 325 LNNHTVLNFS*RYTEMATPEMMSEVDQIKTFKDFLVQYNKLSELC-FNDCIHDFTSRTLK 149
L+N T+ F + PE M ++DQ + + +++Y EL FND +++ S
Sbjct: 290 LSNATIQGFYEEIIGIINPEDMKDIDQARKVAEEILKYPNYQELIQFNDVVYNKLSALYF 349
Query: 148 ST 143
ST
Sbjct: 350 ST 351
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 29.9 bits (64), Expect = 0.85
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 205 LSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQ 80
+SE C N CI +L S E +C CM++++ VSQ
Sbjct: 41 ISEKCTNKCI-TAPGSSLASGEKQCLQRCMDRFMESWNLVSQ 81
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 29.9 bits (64), Expect = 0.85
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 205 LSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQ 80
+SE C N CI +L S E +C CM++++ VSQ
Sbjct: 41 ISEKCTNKCI-TAPGSSLASGEKQCLQRCMDRFMESWNLVSQ 81
>Z81491-3|CAB04018.1| 194|Caenorhabditis elegans Hypothetical
protein D1086.3 protein.
Length = 194
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 181 CIHDFTSRTLKSTEDKCT 128
C+ DF S T KST+D CT
Sbjct: 130 CLEDFKSETKKSTKDTCT 147
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 289 YTEMATPEMMSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTE-DKCTVNCME 113
Y M + + E D+++T + +V+ + L + ++ + + E D CT N +E
Sbjct: 339 YARMISENLGKENDKMQTLTETVVESSGLEKGADEMVRNEIINTVFNAAEEDPCTSNSLE 398
Query: 112 KY 107
KY
Sbjct: 399 KY 400
>Z81103-4|CAB03210.1| 686|Caenorhabditis elegans Hypothetical
protein M04G12.3 protein.
Length = 686
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 122 VDSAFVLGRF*SP-RRKIMNAIIETKFRQLVVLYKEILESFNLINFTH-HFRGRHFCISS 295
+++ FVL SP R+K MNA+ + + Q V +E +ES L H +G+ +S+
Sbjct: 291 INAVFVLQVKTSPLRKKHMNAMTKEEREQEVEAMEEEVESNELTQGCHLKLKGQMMMLST 350
Query: 296 RK 301
+K
Sbjct: 351 KK 352
>AY652943-1|AAT73710.1| 686|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 686
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 122 VDSAFVLGRF*SP-RRKIMNAIIETKFRQLVVLYKEILESFNLINFTH-HFRGRHFCISS 295
+++ FVL SP R+K MNA+ + + Q V +E +ES L H +G+ +S+
Sbjct: 291 INAVFVLQVKTSPLRKKHMNAMTKEEREQEVEAMEEEVESNELTQGCHLKLKGQMMMLST 350
Query: 296 RK 301
+K
Sbjct: 351 KK 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,738,153
Number of Sequences: 27780
Number of extensions: 161524
Number of successful extensions: 460
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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