Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K09
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   194   5e-52
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   189   1e-50
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.1  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
            subunit 1 protein.
          Length = 682

 Score =  194 bits (473), Expect = 5e-52
 Identities = 93/167 (55%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
 Frame = -1

Query: 610  RKMCIEMDRFVTVLNAGENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRND-LTTFNYC 434
            + M IE+DRF   L  G N I R STESS+TIPFE+TFR+L A  N P   D L+ FN+C
Sbjct: 520  KDMFIELDRFAVSLKQGTNTITRHSTESSLTIPFERTFRNLDA--NRPTGGDALSEFNFC 577

Query: 433  GCGWPQHMLVPKGTEAGMPFQLFVMLSNYDLDRIDQDDGKQLTCVEASSFCGLKDKKYPD 254
            GCGWPQHML+PKGTEAG P  LFVM+SNY  DR++QD     TC +  +FCG+KDK YPD
Sbjct: 578  GCGWPQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSG--TCSDGDTFCGIKDKLYPD 635

Query: 253  RRAMGFPFDR-PSSSATSLQDFILPNMGLQDITIQLQN-VTEPNPRN 119
            RR+MG+PFDR P     +LQ F+ PNM +Q++ IQ  N + +P  R+
Sbjct: 636  RRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVIQFSNRIVKPRNRD 682


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
            subunit 2 protein.
          Length = 683

 Score =  189 bits (461), Expect = 1e-50
 Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
 Frame = -1

Query: 616  DXRKMCIEMDRFVTVLNAGENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRND-LTTFN 440
            D + M IE+D+F   L  G+N I R S++SS+TIPFE+TFR+L    N P+  + L  FN
Sbjct: 519  DQKIMFIELDKFTVNLKQGQNTITRASSQSSVTIPFERTFRNLDL--NRPQGGEELAQFN 576

Query: 439  YCGCGWPQHMLVPKGTEAGMPFQLFVMLSNYDLDRIDQDDGKQLTCVEASSFCGLKDKKY 260
            +CGCGWPQHML+PKGT  GM  QLFVM+SNYD D+IDQ    +  C +A S+CG+KDK Y
Sbjct: 577  FCGCGWPQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQ--STEGVCNDAGSYCGIKDKLY 634

Query: 259  PDRRAMGFPFDR-PSSSATSLQDFILPNMGLQDITIQLQNVT-EPNPRN 119
            PDRR+MG+PFDR P +   +LQ F+ PNM +QD+TI+  + T  P  RN
Sbjct: 635  PDRRSMGYPFDRMPRNGVDTLQQFLTPNMRVQDVTIKFSDRTVRPKQRN 683


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = -1

Query: 577 TVLNAGENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRNDLTTFNYCGCGWPQHMLVPK 398
           T  + G+N   R  TE +   P  Q+ R       DP R      ++   GW   ++ P 
Sbjct: 235 TYTDDGKNQ-QRTGTELTKMRPKRQSSRRHRKNLKDPCRRRQMYVDFGSVGWNDWIVAPL 293

Query: 397 GTEA 386
           G +A
Sbjct: 294 GYDA 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,015
Number of Sequences: 336
Number of extensions: 3341
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)