Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_K09
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 31 0.87
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 30 1.5
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 28 4.6
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 28 4.6
AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical ... 28 6.1
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 27 8.1
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical pr... 27 8.1
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 8.1
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 8.1
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 27 8.1
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 30.7 bits (66), Expect = 0.87
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 357 YPTMI*TGSIKMMENSSLVWKRRASVD*RIRN-TLIGALWDSRSTDLQAAPPASRTSFYQ 181
Y +I GS M+++S++ K R S+ IRN + +W S DL+ A F +
Sbjct: 298 YNMLISFGS--MVKSSTMPEKWRNSILSAIRNFPNVTFIWKYESDDLRWAENVENVHFLK 355
Query: 180 TWACRTSLFNC-KTSPNLTHGTL 115
W +T+L N + S LTHG L
Sbjct: 356 -WIPQTALLNNPRVSAFLTHGGL 377
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -1
Query: 223 PSSSATSLQDFILPNMG--LQDIT---IQLQNVTEPNPRNPP 113
P T +Q I+P MG LQDI + L++V E NPR+PP
Sbjct: 296 PKGYLTDMQS-IIPQMGGDLQDIKKARMLLKSVRETNPRHPP 336
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 606 RCVLKWTDSSLS*TPERIILSVSRRSLP*LFRLNRHSATYPLRAMILD-ATTSLPSIT 436
RC K+ S T R++L+ +SLP L + ++ PL ++I+ A T +PS+T
Sbjct: 131 RCWDKYRRGPCSSTIVRLLLATVDKSLPMLLTTSTCASIIPLVSIIVSPAKTIIPSVT 188
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 208 TSLQDFILPNMGLQDITIQLQNVTEPNPRNP 116
++++ F+LPN + IT+QL V P+ RNP
Sbjct: 206 STVRAFLLPNF--EYITLQLSGVRAPSTRNP 234
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 195 TSFYQTWACRTSLFNCKTSPNLTHGTLPCQFKMSQN-*NEIRSLNHKFDF 49
T+ Y R +L+N S H LPC ++ +N N++R L +F +
Sbjct: 827 TNRYSDDFYRAALYNSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTY 876
>AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical
protein Y39G8B.7 protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -2
Query: 420 PSTCS-CPRALKPACPSNCSLCYP 352
P TC+ CP A P SNC C P
Sbjct: 99 PETCNMCPGATTPTPDSNCKDCSP 122
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 420 PSTCSCPRALKPACPSNCSLCYPT 349
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 420 PSTCSCPRALKPACPSNCSLCYPT 349
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = -1
Query: 340 DRIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGF--PFDRPSSSATSL---QDFIL--P 182
D+ID + ++ E S+C D++AM D+ SS+ +L QDF+L P
Sbjct: 146 DKIDLNSDGEVDMAEIKSYCKEMGVNLDDQKAMSIVKKMDQSGSSSVNLNEFQDFMLLYP 205
Query: 181 NMGLQDI 161
+ ++D+
Sbjct: 206 STDMRDM 212
>U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical
protein T25F10.4 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 532 ESSITIPFEQTFRDLSAQGNDPRRNDLTTFN 440
+SS+ I FE F + +G +PR +LTT++
Sbjct: 42 KSSLEISFEICFEWETKRGKEPRNRELTTWS 72
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 420 PSTCSCPRALKPACPSNCSLCYPT 349
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 420 PSTCSCPRALKPACPSNCSLCYPT 349
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 237 SRSTDLQAAPPASRTSFYQTWACRTSLFNCK 145
SRS +AAPP + S TW+ +T F K
Sbjct: 1567 SRSRSREAAPPPQQRSRNSTWSEQTDTFLAK 1597
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 237 SRSTDLQAAPPASRTSFYQTWACRTSLFNCK 145
SRS +AAPP + S TW+ +T F K
Sbjct: 192 SRSRSREAAPPPQQRSRNSTWSEQTDTFLAK 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,104,746
Number of Sequences: 27780
Number of extensions: 323787
Number of successful extensions: 863
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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