Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K08
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...   200   6e-52
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...   199   2e-51
Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z82070-4|CAB04913.2|  227|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score =  200 bits (489), Expect = 6e-52
 Identities = 89/199 (44%), Positives = 134/199 (67%)
 Frame = -1

Query: 717 KLSXGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCD 538
           +L  G+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  C+
Sbjct: 68  ELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIMCN 124

Query: 537 DVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNN 358
            VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLADINN    N TY +NL +
Sbjct: 125 GVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNENNNNPTYKRNLLS 184

Query: 357 LERFVLVMFDNDSIVQPKETEWFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGKLI 178
           L+  VLV F+ D +V PK++ WFGFY  G  + ++ + E+ +Y +DR+GLKK+ ++G++ 
Sbjct: 185 LKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIH 244

Query: 177 FLSTPGDHLRFTEEWMIKN 121
           F+   GDHL+     ++ +
Sbjct: 245 FMDVDGDHLQIPRSVLVND 263


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score =  199 bits (485), Expect = 2e-51
 Identities = 89/190 (46%), Positives = 131/190 (68%)
 Frame = -1

Query: 717 KLSXGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCD 538
           +L  G+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  C+
Sbjct: 68  ELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIMCN 124

Query: 537 DVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNN 358
            VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLADINN    N TY +NL +
Sbjct: 125 GVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVXEYKKRSIFLADINNENNNNPTYKRNLLS 184

Query: 357 LERFVLVMFDNDSIVQPKETEWFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGKLI 178
           L+  VLV F+ D +V PK++ WFGFY  G  + ++ + E+ +Y +DR+GLKK+ ++G++ 
Sbjct: 185 LKNLVLVKFNQDHMVVPKDSXWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIH 244

Query: 177 FLSTPGDHLR 148
           F+   GDHL+
Sbjct: 245 FMDVDGDHLQ 254


>Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical
           protein DY3.5 protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 261 SRPVPERKNRTIPSPSAALCYHYRTSPARIFLD 359
           SRP P   +   PSPS +L    R  PA +++D
Sbjct: 667 SRPAPATSSVVTPSPSQSLTQQIRKLPAVLYID 699


>Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical
           protein C31H5.6 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 714 LSXGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQH 592
           LS   N++G  QG  F   +V     + PQIK +VS+ G H
Sbjct: 227 LSYTTNMLGI-QGVSFGATIVDLLSTRYPQIKAVVSINGPH 266


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +3

Query: 165 ALIRKLIFPLYPFS*GRVDPANKS*IPLTIPISRPVPERKNRTIPSPSAALCYHYRTSP 341
           A+ R   FP  P S G   P+ +  IP  +  +RP P    +  P+P+    Y  + +P
Sbjct: 127 AVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAP 185


>AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical
           protein Y43F4B.5a protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -1

Query: 516 YAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNNL 355
           YA YN +  + LV++TYW  P  E T +  S   AD+     + +  + ++ +L
Sbjct: 451 YALYNRYGFH-LVRSTYWMVPAPEVTKKLFSTLRADLKFPTKIGEAEVASVRDL 503


>Z82070-4|CAB04913.2|  227|Caenorhabditis elegans Hypothetical
           protein W04E12.4 protein.
          Length = 227

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = -1

Query: 555 RHETCDDV-RKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 379
           ++ET DD+  +L+  + Y  W+  +L +A         R YE  +  +  I+  R   K 
Sbjct: 13  KNETWDDILNELMENSEY--WMDMTLPKAE------QRRNYEKMAEVMRRIDVCRERQKA 64

Query: 378 YIQNLNNLERFVLVMFDNDSIVQPKETE 295
            +Q L NLE+ V    +N + +  +E E
Sbjct: 65  TLQKLRNLEKLV-EQDENGAEISEEEQE 91


>Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical
           protein F33H1.5 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 362 FKFCIYVLLTVLTLLMSARNTLFA--SYVRSSKGSCQYVA 475
           F F I+ LLT +  L++ + T+F+  S      G C+YV+
Sbjct: 66  FNFAIFDLLTCVASLLACQKTIFSGLSLTYIFHGPCKYVS 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,488,806
Number of Sequences: 27780
Number of extensions: 323442
Number of successful extensions: 723
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)