Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K07
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         80   6e-17
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.19 
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     28   0.25 
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   4.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.3  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 80.2 bits (189), Expect = 6e-17
 Identities = 39/74 (52%), Positives = 44/74 (59%)
 Frame = -2

Query: 682 QILVGGPNNWVPTSGSNVPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHGVCYIS 503
           ++LV     W   S   VP GA  GG T DGE LY+GR  HEGS T GKVQ SH   YI 
Sbjct: 68  EVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNCIYIP 127

Query: 502 FGGQELGFPDYEVL 461
           +GG E+  P YEVL
Sbjct: 128 YGGAEVSVPTYEVL 141



 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 655 WVPTSGSN-VPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHGVCYISFGGQELGF 479
           W+PTS     PP   PGG   DG  +++GR  H G L   KV       Y+++GGQE   
Sbjct: 5   WIPTSVHGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETLV 64

Query: 478 PDYEVLM 458
              EVL+
Sbjct: 65  EHVEVLV 71


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -2

Query: 691 PQYQILVGGPNNWVPTSGSN--VPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHG 518
           P    L+GGPN+ +P   S   VPP   P  + +   PL I  V H G   +G +  S  
Sbjct: 101 PHSNHLLGGPNHHLPPGASPGLVPP---PQQQQQQQAPLGIPSVAHGGG--SGAIHASPN 155

Query: 517 VCYISFGGQ 491
               S GG+
Sbjct: 156 AQNPSSGGR 164


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 555 PSWRTRPMYKGSPSSVSPPGNAPGGTLDPLVGTQLFGPPT 674
           P W  RP + G P  + PP + P  +     GT +  P T
Sbjct: 94  PPWHPRPPFGGRPWWLRPPFHRPTTSTAAPEGTSVASPTT 133


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 350 FHTGSFDLEQKKADGGL 300
           F+ GSF+  QK +DG L
Sbjct: 34  FNDGSFEASQKSSDGSL 50


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 115  FNNACXLSTRIACRLRFCWKTE 50
            ++N C  + RI  +L+ CW  E
Sbjct: 1003 WSNVCEAAKRITSKLQRCWDDE 1024


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 558 SWRTRPMYKGSPSSVSPPGNAPGGTLDPLVG 650
           SW TR     +     PP  AP G +  ++G
Sbjct: 717 SWGTRENPVDAAKKAPPPVAAPAGKMQKILG 747


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 582  KGSPSSVSPPGNAPGGTLDPLV 647
            KG+P    P  + PGG+  P++
Sbjct: 1136 KGAPMKFGPGVSGPGGSKTPIL 1157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,082
Number of Sequences: 2352
Number of extensions: 15973
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)