Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K07
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha...    29   3.2  
Z81123-4|CAB03367.2|  986|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z54281-8|CAA91051.2|  986|Caenorhabditis elegans Hypothetical pr...    28   5.6  

>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
           protein T22A3.8 protein.
          Length = 3102

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 31  FSKLLQSPSSNKNA-ICMQCACLXHRHY*IY 120
           F++L   P +N +  +C QC C  H H  +Y
Sbjct: 334 FNQLPWKPGTNSHPNVCQQCQCFNHAHSCVY 364


>Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical
           protein T21B4.2 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 670 GGPNNWVPTSGSNVPPG--AFPGGETEDGEPLYIGRVRHEGSLTTGKVQQ 527
           G P N  P+ G+  PPG    PGG   DG+P   G     G++T    QQ
Sbjct: 190 GAPGN-TPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQ 238


>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
           protein T22A3.8 protein.
          Length = 3102

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 31  FSKLLQSPSSNKNA-ICMQCACLXHRHY*IY 120
           F++L   P +N +  +C QC C  H H  +Y
Sbjct: 334 FNQLPWKPGTNSHPNVCQQCQCFNHAHSCVY 364


>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
           chain protein.
          Length = 3102

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 31  FSKLLQSPSSNKNA-ICMQCACLXHRHY*IY 120
           F++L   P +N +  +C QC C  H H  +Y
Sbjct: 334 FNQLPWKPGTNSHPNVCQQCQCFNHAHSCVY 364


>Z81123-4|CAB03367.2|  986|Caenorhabditis elegans Hypothetical
           protein F46C5.6 protein.
          Length = 986

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 RCEKTSKLN*RIVM-KIIHHLLFFAPNQTSRYEICIIMNT 370
           + E   ++  RI+  KIIH L  F P    R E+C I+ T
Sbjct: 250 QAEPVQRVQRRIIATKIIHKLALFLPPNEIRKELCPIVTT 289


>Z54281-8|CAA91051.2|  986|Caenorhabditis elegans Hypothetical
           protein F46C5.6 protein.
          Length = 986

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 RCEKTSKLN*RIVM-KIIHHLLFFAPNQTSRYEICIIMNT 370
           + E   ++  RI+  KIIH L  F P    R E+C I+ T
Sbjct: 250 QAEPVQRVQRRIIATKIIHKLALFLPPNEIRKELCPIVTT 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,751,013
Number of Sequences: 27780
Number of extensions: 375861
Number of successful extensions: 1068
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)