Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_K05
(632 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 331 4e-92
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 62 6e-11
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 47 2e-06
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 32 0.060
SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr 2|||Ma... 30 0.24
SPBC1709.09 |||mitochondrial translation termination factor|Schi... 29 0.74
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 26 3.9
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 25 6.9
SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51... 25 6.9
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 9.1
SPAPB24D3.08c |||NADP-dependent oxidoreductase |Schizosaccharomy... 25 9.1
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 25 9.1
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 331 bits (814), Expect = 4e-92
Identities = 160/203 (78%), Positives = 180/203 (88%)
Frame = -3
Query: 627 GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 448
GRIPSAVGYQPTLATDMG MQERITTTKKGSITSVQA+YVPADDLTDPAPATTFAHLDAT
Sbjct: 319 GRIPSAVGYQPTLATDMGAMQERITTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDAT 378
Query: 447 TVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILG 268
TVLSR+I+ELGIYPAVDPLDS SR+MDP I+G EHYN+A VQ++LQ+YKSLQDIIAILG
Sbjct: 379 TVLSRSISELGIYPAVDPLDSKSRMMDPRILGEEHYNLAGSVQQMLQEYKSLQDIIAILG 438
Query: 267 MDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHL 88
MDELSE DKLTV RARK+QRFLSQPF VAEVFTG G+LV L++TI+ F +IL G +D L
Sbjct: 439 MDELSEADKLTVERARKVQRFLSQPFAVAEVFTGIEGRLVSLKDTIRSFKEILEGKHDSL 498
Query: 87 PEVAXYMVGPIEEVVAKAETLAK 19
PE A YMVG I++ V KAE +A+
Sbjct: 499 PESAFYMVGSIDDAVKKAEKIAQ 521
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 62.1 bits (144), Expect = 6e-11
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Frame = -3
Query: 621 IPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 448
+P GY + TD+ T+ ER + GSIT + + +P DD+T P P T +
Sbjct: 295 VPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQ 354
Query: 447 TVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDII 280
+ R + IYP ++ L S SR+M I +H +V+ + + + +
Sbjct: 355 IFVDRQLHNNAIYPPINVLPSLSRLMKSAIGEGMTRNDHGDVSNQLYAMYAIGRDAASMK 414
Query: 279 AILGMDELSEEDKLTVARARKIQR-FLSQ 196
+++G + LS+ED+L + K ++ F+SQ
Sbjct: 415 SVVGEEALSQEDRLALEFLGKFEKTFISQ 443
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 47.2 bits (107), Expect = 2e-06
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Frame = -3
Query: 621 IPSAVGYQPTLATDMGTMQERI-------TTTKKGSITSVQAIYVPADDLTDPAPATTFA 463
+P+ GY L + + ER + ++G+++ V A+ P D +DP + T
Sbjct: 376 MPADSGYPAYLGAKLASFYERAGRARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLG 435
Query: 462 HLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH----YNVARG-VQKILQDYK 298
+ L + +A+ +P+++ S S+ ++ E +N R +++I+Q
Sbjct: 436 IVQVFWGLDKKLAQRKHFPSINTSLSYSKYINALQPWYEERVPGFNTLRDQIKQIIQQED 495
Query: 297 SLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 196
S+ +II ++G LSE DK+T+ A I+ FL Q
Sbjct: 496 SMLEIIQLVGKSALSETDKVTLDIAGIIKNDFLQQ 530
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 32.3 bits (70), Expect = 0.060
Identities = 29/116 (25%), Positives = 48/116 (41%)
Frame = -3
Query: 540 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 361
GS+T++ I D++ P + D L + GI PA++ S SR+
Sbjct: 347 GSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAINVGLSVSRVGSAA 406
Query: 360 IIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQP 193
+ A VA ++ L Y+ + A G D L + T+ R ++ L QP
Sbjct: 407 QVKAMK-QVAGQIKLFLAQYREVAS-FAQFGSD-LDAGTRATLDRGLRLTELLKQP 459
>SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 30.3 bits (65), Expect = 0.24
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -3
Query: 525 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA--VDPLDSTSRIMDPNIIG 352
+ I VP D P F + SR +A G P+ V+P +S ++I+D I
Sbjct: 91 IAIIGVPFDTAVSHRPGARFGPKGIRSASSRQMAIRGFNPSLNVNPYESWAKILDCGDIP 150
Query: 351 AEHYNVARGVQKILQDYKSL 292
Y+ V+++ + Y L
Sbjct: 151 VSSYDNQLAVRQMTEGYIDL 170
>SPBC1709.09 |||mitochondrial translation termination
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.74
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = -3
Query: 567 QERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 445
QE + +G+ T ++A+++P+ + P P+ + A +
Sbjct: 78 QEAVVLPSQGNFTQLEALFIPSKSIKAPTPSRLLREIAAVS 118
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 549 TKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 412
TK G++ + V + DPA A +L+ +V RA A LG+
Sbjct: 439 TKAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVKLRASAILGL 484
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/54 (18%), Positives = 28/54 (51%)
Frame = +1
Query: 457 QVSKSGSWSRICQVISWYINSLYRCDGTFLGGGNSFLHSTHVSSQSRLISYSRW 618
++S++ S+ ++++ Y+ + D F+G SF+ +T +++ + W
Sbjct: 302 RISRADSYDHDIRMLAKYLQEVTLMDEIFIGAHISFIAATAYYLSMQMLGHLDW 355
>SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51-b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 140 SSGTSLPACPVNTSATWKGCERNL*ILRARATVNLSSSDNSS 265
S G P+ S CE N +R R T ++ SSD S+
Sbjct: 130 SGGIQYSNVPLINSRVTPNCESNCSNIRRRLTAHIISSDAST 171
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = -3
Query: 399 DPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILG 268
+ +D+T + +P I E V + Q ++ + + ++DI++ LG
Sbjct: 371 EEIDATIQTYNPQNIDLEDEAVEKEWQDLVAEEQKVEDIVSTLG 414
>SPAPB24D3.08c |||NADP-dependent oxidoreductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 25.0 bits (52), Expect = 9.1
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = -3
Query: 366 PNIIGAEHYN--VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQP 193
P +G YN VA+ V+ L YK D++ + G +E + K + + I + P
Sbjct: 74 PLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQALGFLQPI----NNP 129
Query: 192 FQVAEV-FTGHAGKLVPLEET---IKGFSKILAGDYDHLPEVAXYMVGPIEEVVAKA 34
+++ + F G G +P + +K K AG+ ++ A VG + +AKA
Sbjct: 130 YKLPLIDFVGSLG--MPSQTAYCGLKHIGKPKAGETIYI-SAASGAVGQMAGQLAKA 183
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 414 YP-IQQWLWRVQW*HPS 461
YP I QWL R+ W HP+
Sbjct: 259 YPHINQWLKRLYWKHPA 275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,657,841
Number of Sequences: 5004
Number of extensions: 57797
Number of successful extensions: 164
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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