Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K05
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   363   e-101
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    59   2e-09
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    58   4e-09
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    56   3e-08
Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U23513-1|ABD94110.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z50797-5|CAA90675.1|  342|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  363 bits (893), Expect = e-101
 Identities = 176/203 (86%), Positives = 187/203 (92%)
 Frame = -3

Query: 627 GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 448
           GRIPSAVGYQPTLATDMG+MQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT
Sbjct: 332 GRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 391

Query: 447 TVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILG 268
           TVLSR IAEL IYPAVDPLDSTSRIMDPN++G  HY++ARGVQKILQDYKSLQDIIAILG
Sbjct: 392 TVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQKILQDYKSLQDIIAILG 451

Query: 267 MDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHL 88
           MDELSEEDKLTV+RARKIQRFLSQPFQVAEVFTGH GK V LEETI+GF+ IL G+ DHL
Sbjct: 452 MDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRGFTMILKGELDHL 511

Query: 87  PEVAXYMVGPIEEVVAKAETLAK 19
           PEVA YM G I++V  KAE LAK
Sbjct: 512 PEVAFYMQGGIDDVFKKAEELAK 534


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
 Frame = -3

Query: 621 IPSAVGYQPTLATDMGTMQERITTTK--KGSITSVQAIYVPADDLTDPAPATTFAHLDAT 448
           +P   G+   + TD+ T+ ER    K  +GSIT +  + +P +D+T P P  T    +  
Sbjct: 309 VPGRRGFPGYMYTDLATIYERAGRVKGREGSITQIPILTMPNNDITHPIPDLTGYITEGQ 368

Query: 447 TVLSRAIAELGIYPAVDPLDSTSRIM----DPNIIGAEHYNVARGVQKILQDYKSLQDII 280
             + + + +  IYP +D L S SR+M       +   +H +++  +       K +Q + 
Sbjct: 369 IYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEGMTREDHSDLSNQLYACYAMGKDVQAMK 428

Query: 279 AILGMDELSEEDKLTVARARKIQR-FLSQ 196
           A++G++ LS +D L +    K ++ F++Q
Sbjct: 429 AVVGVEALSPDDLLYLEFLAKFEKNFIAQ 457


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
 Frame = -3

Query: 621 IPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 448
           +P   G+   + TD+ T+ ER      + GSIT +  + +P DD+T P P  T    +  
Sbjct: 297 VPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDITHPIPDLTGYITEGQ 356

Query: 447 TVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDII 280
             + R +    IYP ++ L S SR+M   I       +H +V+  +       K +Q + 
Sbjct: 357 IYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMK 416

Query: 279 AILGMDELSEEDKLTVARARKIQR-FLSQ 196
           A++G + LS +D L +    K ++ F++Q
Sbjct: 417 AVVGEEALSSDDLLYLEFLTKFEKNFITQ 445


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
 Frame = -3

Query: 627 GRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYVPADDLTDPAPATT 469
           G +P+  GY   LA  + +  ER    K       +GS+T V A+  P  D  DP  + T
Sbjct: 355 GEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSAT 414

Query: 468 FAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM-------DPNIIGAEHYNVARGVQKIL 310
              +     L + +A+   +P+++ L S S  M       + N    E  ++    ++IL
Sbjct: 415 LGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNY--PEFVSLRTKCKEIL 472

Query: 309 QDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETI 130
           Q+ + L +I+ ++G   L+E DK+T+    ++ + +   F     +T +  +  P  +T+
Sbjct: 473 QEEEDLSEIVQLVGKASLAESDKVTL----EVAKIIKDDFLQQNGYTKY-DRFCPFYKTV 527

Query: 129 KGFSKILAGDYD 94
            G  K + G YD
Sbjct: 528 -GMLKNMIGFYD 538


>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -3

Query: 603 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 442
           Y PT  T     T+    TTT+  + T+V+      A  +T P P TT +    TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202


>AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical
           protein T06A4.1b protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 26/112 (23%), Positives = 45/112 (40%)
 Frame = -3

Query: 585 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 406
           T+  T +E  TTT +   T+      P +  T+P+P T  A   +TT  +   +E     
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540

Query: 405 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 250
             +P   TS  + P     E   +         DY  L  ++ +   D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592


>Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical
           protein W04G5.9 protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 21/77 (27%), Positives = 32/77 (41%)
 Frame = -3

Query: 594 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 415
           T+AT   +     TTTK  + T++    +     T P P TT   +  TT  +R IA   
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230

Query: 414 IYPAVDPLDSTSRIMDP 364
               V P+    + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/60 (30%), Positives = 23/60 (38%)
 Frame = -3

Query: 597 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 418
           PT  T   T  +  TTT   +  +      P    T PAP TT      TT+ +   A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478


>U23513-1|ABD94110.1|  294|Caenorhabditis elegans Hypothetical
           protein D2021.4a protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -3

Query: 381 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 205
           ++I D N+I + HYN V+ G  + L D K ++ +  +   D   E  K+ +A  +   +F
Sbjct: 56  NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114

Query: 204 LSQ-PF 190
           L + PF
Sbjct: 115 LRKIPF 120


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 511 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 612
           INSL +   GTFLG G   +   HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 319 ENSSGLQIPAGHYCYFG 269
           ENS+G +  AGH+C+ G
Sbjct: 424 ENSNGTECSAGHWCHIG 440


>Z50797-5|CAA90675.1|  342|Caenorhabditis elegans Hypothetical
           protein T22H6.4 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 459 LDATTVLSRAIAELGIYPAVDPLDSTSRIMD 367
           +D     ++  A LGIYPA+DP+ +   I D
Sbjct: 275 IDVGVAANKTAAFLGIYPALDPMIAIFLIKD 305


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,732,800
Number of Sequences: 27780
Number of extensions: 329582
Number of successful extensions: 934
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)