Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K03
         (515 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0854 + 21086253-21086258,21086320-21086480,21087065-210871...    28   5.1  
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662...    28   5.1  
08_02_1298 - 25964937-25965039,25965297-25965363,25965540-259656...    27   6.8  
04_01_0621 - 8166221-8166556                                           27   6.8  
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348...    27   8.9  

>10_08_0854 +
           21086253-21086258,21086320-21086480,21087065-21087175,
           21087275-21087329,21087796-21087963,21088232-21090082,
           21090355-21090690
          Length = 895

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 159 GVSRTNQSGTHNCPAAEIAGVLVLT 85
           G+SRT QS T NC  ++ A VL +T
Sbjct: 487 GISRTEQSLTPNCQQSKEAQVLTVT 511


>03_02_0234 +
           6625417-6626184,6626314-6626339,6626435-6626531,
           6627009-6627116,6627194-6627328,6627429-6627528,
           6627763-6627974,6628060-6628125,6628231-6628464,
           6628583-6628641,6628716-6628782,6628863-6629192,
           6629267-6629335,6629417-6629503,6629605-6629692,
           6630057-6630178,6630251-6630355,6630442-6630485,
           6630558-6630627,6630711-6630814,6630980-6631189,
           6632935-6633018,6633291-6634003,6634115-6634649,
           6634703-6634789,6634826-6634970,6635049-6635125,
           6635215-6635359,6635462-6635626,6635725-6635958
          Length = 1761

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 50  NRWGVERTERIPVSTNTPAISAAGQLCVPD*LVRLTPN 163
           N+   ER +RIPV          G +  PD  VRL PN
Sbjct: 842 NKDDYERVQRIPVKKGANFRDLKGVIVGPDNTVRLDPN 879


>08_02_1298 -
           25964937-25965039,25965297-25965363,25965540-25965661,
           25965868-25965951,25966138-25966234,25966330-25966372,
           25966490-25966560,25966751-25966878,25967168-25967258,
           25967357-25967472,25967566-25967639
          Length = 331

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 110 SAAGQLCVPD*LVRLTPNTXLYSSCFFSLPIS*LCYNR 223
           SAAG+ C  D      P+    ++ FFS PIS LCY R
Sbjct: 37  SAAGRRCSSDDSACSEPSEQ-QNADFFSGPISSLCYTR 73


>04_01_0621 - 8166221-8166556
          Length = 111

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +2

Query: 284 GSCGLENRSSLFLKQYPLSFSE----FPRSSSVC 373
           G C +E  +S+FL + PL FS+    FPR    C
Sbjct: 35  GQCVMEKATSVFLIRSPLLFSQDLFAFPRREESC 68


>01_06_1626 -
           38734128-38734160,38734386-38734560,38734819-38734878,
           38734961-38735059,38735191-38735224,38735315-38735374,
           38735596-38735696,38735949-38736014,38736695-38736825,
           38736946-38737038,38737273-38737338,38737459-38737494,
           38738308-38738382,38738475-38738792
          Length = 448

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -3

Query: 177 EYXNVFGVSRTNQSGTHNCPAAEIAGVLVLTGIRSVRSTPQRFYSGH 37
           E  N FG     ++  HN    ++A  +V  G+R + S   ++Y  H
Sbjct: 362 ETFNNFGDKLDRRTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDH 408


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,562,312
Number of Sequences: 37544
Number of extensions: 219951
Number of successful extensions: 374
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)