Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_K02
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    58   2e-07
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    40   0.046
UniRef50_A4RL43 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_Q1FHK7 Cluster: Binding-protein-dependent transport sys...    33   5.2  
UniRef50_Q7R8F1 Cluster: GAF domain protein; n=3; Plasmodium (Vi...    33   6.9  
UniRef50_Q8XJW3 Cluster: V-type sodium ATP synthase subunit C; n...    33   9.2  
UniRef50_Q57WV9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = -2

Query: 689 LADPADFVVPQSINKRPKLLYXINXKQTKESVRRG-THQRKNKIVIFI*FRAFSYL 525
           LADPADFVVPQSINKRPK LY IN KQTK   + G T + K     ++  R F ++
Sbjct: 22  LADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77



 Score = 56.4 bits (130), Expect = 7e-07
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = -1

Query: 618 LXTNKGIRPTGYTSKEKQNCYFYLIPGIFIFI 523
           L   KGIR TG TSKEKQNCYFYLIP IFIFI
Sbjct: 46  LKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 40.3 bits (90), Expect = 0.046
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +3

Query: 441 LKLEYGWTDLANFGLE*FVKSREGLK 518
           LKLE GWTDLANFGLE  V+ + GLK
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_A4RL43 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 566

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -2

Query: 197 VFIKNYNQNFCFWINLNSFFLNTICLAFTAFINLSNN*CNKKWV*IIR 54
           VF  + N  +CFWIN+   F++ + + F   IN  NN   K+ +  IR
Sbjct: 220 VFTDHINWRWCFWINVPIGFISIVVVVFFVNINRDNNPQRKRLIDRIR 267


>UniRef50_Q1FHK7 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           phytofermentans ISDg|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           phytofermentans ISDg
          Length = 324

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -2

Query: 638 KLLYXINXKQTKESVRRGTHQRKNKIVIFI*FRAFSYLFTF*TLSGLHKSFKTKISQIG 462
           ++L  +  K  KES R    Q  N  + +I    FS LF++  ++GL  +FK   + +G
Sbjct: 3   RILKKVKQKTGKESFRAQMKQHGNLFIFYIPAVVFSILFSYIPMAGLIMAFKANPNLLG 61


>UniRef50_Q7R8F1 Cluster: GAF domain protein; n=3; Plasmodium
           (Vinckeia)|Rep: GAF domain protein - Plasmodium yoelii
           yoelii
          Length = 703

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 138 KKTIQINPKTKILIIIFDKNKKQYLFVTQLNIFYIPATIQI 260
           KK  Q    +   + IFDKNK Q+  +   N+ YIP T  I
Sbjct: 528 KKLPQYINSSYAFLFIFDKNKNQFYTIINNNLIYIPITHDI 568


>UniRef50_Q8XJW3 Cluster: V-type sodium ATP synthase subunit C; n=4;
           Clostridium|Rep: V-type sodium ATP synthase subunit C -
           Clostridium perfringens
          Length = 335

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 454 YSSFSETNEQQFIFIYIDKAKNAYKN*TISQKNLTDKILD 335
           +  F ETN+ QFI +  D+   A+ +   ++KN+ DK LD
Sbjct: 149 FEKFEETNDPQFIDLIADQYLYAHIHEIANKKNIKDKALD 188


>UniRef50_Q57WV9 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 550

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 567 VFPLMCTPSDGFLCLFXVYXIQKFRSFIYRLRHYEVCR 680
           V  L+CT  DGF+C F +  +   R+  + L+   VCR
Sbjct: 161 VISLLCTVVDGFVCTFTIDAVTISRARSHSLKASNVCR 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,880,759
Number of Sequences: 1657284
Number of extensions: 10605397
Number of successful extensions: 25064
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25052
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)