Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_J22
(578 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017883-1|AAH17883.1| 279|Homo sapiens mitochondrial ribosomal... 121 2e-27
AF210056-1|AAG43507.1| 279|Homo sapiens C15orf4 protein. 121 2e-27
AF205435-1|AAG33698.1| 210|Homo sapiens P2ECSL protein. 121 2e-27
AK074053-1|BAB84879.1| 118|Homo sapiens FLJ00124 protein protein. 81 4e-15
BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding prote... 33 0.96
BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing bi... 33 0.96
AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding prote... 33 0.96
AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein ... 33 0.96
BC012084-1|AAH12084.1| 214|Homo sapiens phosphatidylcholine tra... 32 1.3
BC005112-1|AAH05112.1| 193|Homo sapiens Unknown (protein for IM... 32 1.3
AF151638-1|AAF02536.1| 214|Homo sapiens phosphatidylcholine tra... 32 1.3
AF114436-1|AAF08347.1| 214|Homo sapiens phosphatidylcholine tra... 32 1.3
AF114430-1|AAF08345.1| 211|Homo sapiens phosphatidylcholine tra... 32 1.3
AF087857-1|AAP97167.1| 214|Homo sapiens phosphatidylcholine tra... 32 1.3
S81944-1|AAB36480.1| 453|Homo sapiens gamma-aminobutyric acid t... 30 6.8
BC099641-1|AAH99641.1| 453|Homo sapiens gamma-aminobutyric acid... 30 6.8
BC099640-1|AAH99640.1| 453|Homo sapiens gamma-aminobutyric acid... 30 6.8
BC096242-1|AAH96242.1| 453|Homo sapiens gamma-aminobutyric acid... 30 6.8
BC096241-1|AAH96241.1| 453|Homo sapiens gamma-aminobutyric acid... 30 6.8
>BC017883-1|AAH17883.1| 279|Homo sapiens mitochondrial ribosomal
protein L46 protein.
Length = 279
Score = 121 bits (291), Expect = 2e-27
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 7/167 (4%)
Frame = -1
Query: 560 KAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLV 381
KA+ D + D + + AQD ED +++ +FK G T+AD+K D+TS R L R+LVL+
Sbjct: 102 KADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLL 160
Query: 380 TQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSE 201
+ K G+ +LPQ WQ GETLR TAER + + ++ KF+ NAPCG Y +K+P
Sbjct: 161 VREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQA 220
Query: 200 M--NGKVGAKIFFYYANYKSGN----PTKSKVNWLTRKEL-DEMXPQ 81
M +GAK+FF+ A +G+ K W+T+ EL D + P+
Sbjct: 221 MRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDYLKPK 267
>AF210056-1|AAG43507.1| 279|Homo sapiens C15orf4 protein.
Length = 279
Score = 121 bits (291), Expect = 2e-27
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 7/167 (4%)
Frame = -1
Query: 560 KAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLV 381
KA+ D + D + + AQD ED +++ +FK G T+AD+K D+TS R L R+LVL+
Sbjct: 102 KADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLL 160
Query: 380 TQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSE 201
+ K G+ +LPQ WQ GETLR TAER + + ++ KF+ NAPCG Y +K+P
Sbjct: 161 VREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQA 220
Query: 200 M--NGKVGAKIFFYYANYKSGN----PTKSKVNWLTRKEL-DEMXPQ 81
M +GAK+FF+ A +G+ K W+T+ EL D + P+
Sbjct: 221 MRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDYLKPK 267
>AF205435-1|AAG33698.1| 210|Homo sapiens P2ECSL protein.
Length = 210
Score = 121 bits (291), Expect = 2e-27
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 7/167 (4%)
Frame = -1
Query: 560 KAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLV 381
KA+ D + D + + AQD ED +++ +FK G T+AD+K D+TS R L R+LVL+
Sbjct: 33 KADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLL 91
Query: 380 TQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSE 201
+ K G+ +LPQ WQ GETLR TAER + + ++ KF+ NAPCG Y +K+P
Sbjct: 92 VREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSKNNMEAKFLGNAPCGHYTFKFPQA 151
Query: 200 M--NGKVGAKIFFYYANYKSGN----PTKSKVNWLTRKEL-DEMXPQ 81
M +GAK+FF+ A +G+ K W+T+ EL D + P+
Sbjct: 152 MRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDYLKPK 198
>AK074053-1|BAB84879.1| 118|Homo sapiens FLJ00124 protein protein.
Length = 118
Score = 80.6 bits (190), Expect = 4e-15
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = -1
Query: 560 KAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLV 381
KA+ D + D + + AQD ED +++ +FK G T+AD+K D+TS R L R+LVL+
Sbjct: 17 KADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLL 75
Query: 380 TQRKLGNDSKTLLPQGHWQEGETLRQTAER 291
+ K G+ +LPQ WQ GETLR TAER
Sbjct: 76 VREKFGDQDVWILPQAEWQPGETLRGTAER 105
>BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.96
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -1
Query: 566 LFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTERCLQRHL 390
L +++S D D+ + A++ + E K KF ++D D +T E+ +Q+
Sbjct: 217 LDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQN 276
Query: 389 VLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCG 228
L + + K P G WQE + ++ E + E +E + S A G
Sbjct: 277 SLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGG 330
>BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing
binding protein 4 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.96
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -1
Query: 566 LFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTERCLQRHL 390
L +++S D D+ + A++ + E K KF ++D D +T E+ +Q+
Sbjct: 217 LDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQN 276
Query: 389 VLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCG 228
L + + K P G WQE + ++ E + E +E + S A G
Sbjct: 277 SLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGG 330
>AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.96
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -1
Query: 566 LFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTERCLQRHL 390
L +++S D D+ + A++ + E K KF ++D D +T E+ +Q+
Sbjct: 217 LDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQN 276
Query: 389 VLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCG 228
L + + K P G WQE + ++ E + E +E + S A G
Sbjct: 277 SLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGG 330
>AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein 21
protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.96
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -1
Query: 566 LFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTERCLQRHL 390
L +++S D D+ + A++ + E K KF ++D D +T E+ +Q+
Sbjct: 217 LDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQN 276
Query: 389 VLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCG 228
L + + K P G WQE + ++ E + E +E + S A G
Sbjct: 277 SLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGG 330
>BC012084-1|AAH12084.1| 214|Homo sapiens phosphatidylcholine
transfer protein protein.
Length = 214
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 224 YKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTR 108
YK E +GK G+K+F YY + G +NW +
Sbjct: 155 YKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAK 193
>BC005112-1|AAH05112.1| 193|Homo sapiens Unknown (protein for
IMAGE:4026343) protein.
Length = 193
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 224 YKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTR 108
YK E +GK G+K+F YY + G +NW +
Sbjct: 134 YKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAK 172
>AF151638-1|AAF02536.1| 214|Homo sapiens phosphatidylcholine
transfer protein protein.
Length = 214
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 224 YKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTR 108
YK E +GK G+K+F YY + G +NW +
Sbjct: 155 YKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAK 193
>AF114436-1|AAF08347.1| 214|Homo sapiens phosphatidylcholine
transfer protein protein.
Length = 214
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 224 YKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTR 108
YK E +GK G+K+F YY + G +NW +
Sbjct: 155 YKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAK 193
>AF114430-1|AAF08345.1| 211|Homo sapiens phosphatidylcholine
transfer protein protein.
Length = 211
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 224 YKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTR 108
YK E +GK G+K+F YY + G +NW +
Sbjct: 155 YKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAK 193
>AF087857-1|AAP97167.1| 214|Homo sapiens phosphatidylcholine
transfer protein protein.
Length = 214
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 224 YKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTR 108
YK E +GK G+K+F YY + G +NW +
Sbjct: 155 YKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAK 193
>S81944-1|AAB36480.1| 453|Homo sapiens gamma-aminobutyric acid type
A receptor alpha 6 subunit protein.
Length = 453
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 254 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 379
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC099641-1|AAH99641.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 254 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 379
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC099640-1|AAH99640.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 254 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 379
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC096242-1|AAH96242.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 254 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 379
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC096241-1|AAH96241.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 254 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 379
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,684,445
Number of Sequences: 237096
Number of extensions: 1336187
Number of successful extensions: 2968
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2963
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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