Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J22
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    24   1.2  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    24   1.2  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    24   1.2  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    24   1.2  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    24   1.2  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    24   1.2  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    24   1.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.2  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   8.8  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 482 EYSKFKFGNLETDADKKGDKTSTERCLQRHLV 387
           EY K++    ET  ++  D+T  ERC +  ++
Sbjct: 55  EYQKYR----ETSKERSRDRTERERCKEPKII 82


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 178 KFFSTMQTTKVAILQSLK 125
           KFFS   T+++ I +SLK
Sbjct: 247 KFFSRSSTSRIVISESLK 264


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 424 LSPFLSASVS 453
           LSPFLS+SVS
Sbjct: 2   LSPFLSSSVS 11


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,653
Number of Sequences: 438
Number of extensions: 2590
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)