Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_J19
         (381 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688...    27   3.8  
03_06_0193 + 32243458-32243556,32243566-32244273                       27   6.6  

>05_06_0191 -
           26265460-26267016,26267858-26268356,26268789-26268859,
           26269079-26269515,26269626-26269681,26269682-26270479,
           26270918-26270973
          Length = 1157

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +3

Query: 258 RSDSCITPGRRLTXF*RQMSTSRYRLTSQICHSGXPCVW 374
           R   C +P RR+     +   S    +  + H G PC W
Sbjct: 504 RPRDCTSPARRIVSSSLEELASNTSQSGSLWHGGTPCCW 542


>03_06_0193 + 32243458-32243556,32243566-32244273
          Length = 268

 Score = 26.6 bits (56), Expect = 6.6
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 360 CLNDRSETSDDNERLTSDVKTXSIFDPELYSCQNEVLNLTGSDDEI 223
           C N   E  DD E L  D ++    D E Y  ++++      DDEI
Sbjct: 172 CENPDDEIFDDEEELDDDDESLDDDDIECYDVEDKICE-ENPDDEI 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,367,956
Number of Sequences: 37544
Number of extensions: 99595
Number of successful extensions: 188
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)